RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
TUBB3-215ENST00000625617 TESMINQ9Y4I5 508 aa13.13□□□□□ -0.31
TUBB3-215ENST00000625617 HRNRQ86YZ3 2850 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-215ENST00000625617 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 A0A1B0GTL3 188 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 A0A1W2PNV4 684 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 A8MXE2 369 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 TNFSF13O75888 250 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF708P17019 499 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 TSPAN8P19075 237 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 TCEA1P23193 301 aaKnown RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 CASQ1P31415 396 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 STARP49675 285 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 CLDN18P56856 261 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 TRA2BP62995 288 aaKnown RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 EFR3AQ14156 821 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF628Q5EBL2 1059 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 UBAP2Q5T6F2 1119 aaKnown RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 CLEC9AQ6UXN8 241 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 P4HA3Q7Z4N8 544 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF483Q8TF39 744 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ERP27Q96DN0 273 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF681Q96N22 645 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ADOQ96SZ5 270 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 MRPL57Q9BQC6 102 aaKnown RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 ZDHHC18Q9NUE0 388 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 TRPS1Q9UHF7 1281 aa13.12□□□□□ -0.31
TUBB3-215ENST00000625617 GPR55Q9Y2T6 319 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-215ENST00000625617 A8MT66 165 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 MSTNO14793 375 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 ARHGEF9O43307 516 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 HCRTR2O43614 444 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 COL6A2P12110 1019 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 HSD3B1P14060 373 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 GRK2P25098 689 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 HSD3B2P26439 372 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 DPP4P27487 766 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 SERPINB9P50453 376 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 CDH13P55290 713 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 CORO7P57737 925 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 PSPHP78330 225 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 Q5PR19 223 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF572Q7Z3I7 529 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 SAMD14Q8IZD0 417 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 OR9A2Q8NGT5 310 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF592Q92610 1267 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 VSTM2LQ96N03 204 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 PAFAH2Q99487 392 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF395Q9H8N7 513 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-215ENST00000625617 ANKRA2Q9H9E1 313 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 GIMAP4Q9NUV9 329 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 VPS29Q9UBQ0 182 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 MCM8Q9UJA3 840 aa13.11□□□□□ -0.31
TUBB3-215ENST00000625617 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 FAM171A2A8MVW0 826 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 PPP6CO00743 305 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 PCDH7O60245 1069 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 TSPAN2O60636 221 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 OR4F21O95013 312 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 TGM6O95932 706 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 KRT6AP02538 564 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 KRT6BP04259 564 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CRHP06850 196 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 IL3P08700 152 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CT45A8P0DMV1 189 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CT45A9P0DMV2 189 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 KRT6CP48668 564 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 MRPS22P82650 360 aaKnown RBP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CSTF3Q12996 717 aaKnown RBP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CT45A2Q5DJT8 189 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 TCHHL1Q5QJ38 904 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 FAM219BQ5XKK7 198 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 OR5M10Q6IEU7 315 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 OR2A2Q6IF42 318 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 NPSR1Q6W5P4 371 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CHMP1BQ7LBR1 199 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 P3H2Q8IVL5 708 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CCDC116Q8IYX3 515 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 CNEP1R1Q8N9A8 125 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 KAT2AQ92830 837 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 EXOSC8Q96B26 276 aaKnown RBP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 FAM111AQ96PZ2 611 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 FUT8Q9BYC5 575 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 ZNF226Q9NYT6 803 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 C6orf203Q9P0P8 240 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 SENP1Q9P0U3 644 aa13.1□□□□□ -0.31
TUBB3-215ENST00000625617 MRPS18CQ9Y3D5 142 aaKnown RBP13.1□□□□□ -0.31
TUBB3-215ENST00000625617 NIPBLQ6KC79 2804 aaeCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms