RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 FAM180BQ6P0A1 224 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 PODNL1Q6PEZ8 512 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 GOLGA7Q7Z5G4 137 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 CDK15Q96Q40 435 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 ADOQ96SZ5 270 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 IPPKQ9H8X2 491 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
PNKP-218ENST00000625299 ABCA1O95477 2261 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 CR1P17927 2039 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 NBEAL1Q6ZS30 2694 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 A0A087X1B8 175 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 FRG2CA6NGY1 282 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 SYCE1LA8MT33 242 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 FOXE1O00358 373 aaPredicted RBP13.23□□□□□ -0.29
PNKP-218ENST00000625299 EMC8O43402 210 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 ZIC3O60481 467 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 ABCB7O75027 752 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 SEMA3DO95025 777 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 CBX7O95931 251 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 CGAP01215 116 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 THBDP07204 575 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 C8BP07358 591 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 LTA4HP09960 611 aaKnown RBP13.23□□□□□ -0.29
PNKP-218ENST00000625299 CD8BP10966 210 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 PAX1P15863 534 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 PCSK2P16519 638 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 TBXA2RP21731 343 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 GRK2P25098 689 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 IL12BP29460 328 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 SPRP35270 261 aaPredicted RBP13.23□□□□□ -0.29
PNKP-218ENST00000625299 KRT20P35900 424 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 MAPK12P53778 367 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 MRPS35P82673 323 aaKnown RBP13.23□□□□□ -0.29
PNKP-218ENST00000625299 MAP4K2Q12851 820 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 GTF2H2Q13888 395 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 BCL2A1Q16548 175 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 TRMT12Q53H54 448 aaKnown RBP13.23□□□□□ -0.29
PNKP-218ENST00000625299 ALKBH2Q6NS38 261 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 GTF2H2CQ6P1K8 395 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 WFDC8Q8IUA0 241 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 FNDC9Q8TBE3 224 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 IGFBPL1Q8WX77 278 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 ATP6V1E2Q96A05 226 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 KLHL29Q96CT2 875 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 MRPL1Q9BYD6 325 aaKnown RBP13.23□□□□□ -0.29
PNKP-218ENST00000625299 SAYSD1Q9NPB0 183 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 PFDN4Q9NQP4 134 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 YAE1D1Q9NRH1 226 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 PRODH2Q9UF12 536 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 LAMP3Q9UQV4 416 aa13.23□□□□□ -0.29
PNKP-218ENST00000625299 TCRBV9S1A1TA0A576 114 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 TP73O15350 636 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 SCO2O43819 266 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 UGDHO60701 494 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 NME6O75414 186 aaPredicted RBP13.22□□□□□ -0.29
PNKP-218ENST00000625299 ATP1B1P05026 303 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 MTHFD2P13995 350 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 HK1P19367 917 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 CSNK2A2P19784 350 aaPredicted RBP13.22□□□□□ -0.29
PNKP-218ENST00000625299 DRD5P21918 477 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 PPICP45877 212 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 ALDH9A1P49189 494 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 EEFSECP57772 596 aaKnown RBP13.22□□□□□ -0.29
PNKP-218ENST00000625299 B3GALT5-AS1P59052 145 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 IRF9Q00978 393 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 DUSP2Q05923 314 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 FGFBP1Q14512 234 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 PON3Q15166 354 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 TTC19Q6DKK2 380 aaPredicted RBP13.22□□□□□ -0.29
PNKP-218ENST00000625299 SLC48A1Q6P1K1 146 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 PAGE2Q7Z2X7 111 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 OR5M1Q8NGP8 315 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 KCTD4Q8WVF5 259 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 TMEM158Q8WZ71 300 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 PLPPR2Q96GM1 343 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 ANKRA2Q9H9E1 313 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 RNF122Q9H9V4 155 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 AHSPQ9NZD4 102 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 PPP4R1LQ9P1A2 415 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 ZNF639Q9UID6 485 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 SNX24Q9Y343 169 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
PNKP-218ENST00000625299 C1orf226A1L170 272 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 FAM159BA6NKW6 160 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 B4DXG7 233 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 H3BML4 177 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 HS3ST1O14792 307 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 TO15178 435 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 KLF4O43474 513 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 SOX30O94993 753 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 SIX3O95343 332 aaPredicted RBP13.21□□□□□ -0.29
PNKP-218ENST00000625299 CLDN9O95484 217 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 CRABP2P29373 138 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 EMDP50402 254 aa13.21□□□□□ -0.29
PNKP-218ENST00000625299 SUCLG1P53597 346 aaKnown RBP13.21□□□□□ -0.29
PNKP-218ENST00000625299 DSCR4P56555 118 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms