RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 IL7RP16871 459 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ITIH1P19827 911 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 POLR2IP36954 125 aaKnown RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 CHRNEQ04844 493 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 SLC13A2Q13183 592 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ANKRD34AQ69YU3 496 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 PRSS42Q7Z5A4 293 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 RANBP3LQ86VV4 465 aaPredicted RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 COX18Q8N8Q8 333 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 BPIFB6Q8NFQ5 453 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 VANGL1Q8TAA9 524 aaPredicted RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 MYDGFQ969H8 173 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 OR1F2PQ96R84 312 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 CXorf21Q9HAI6 301 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 FANCEQ9HB96 536 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 PRTFDC1Q9NRG1 225 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 C14orf105Q9NVL8 296 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 RNF215Q9Y6U7 377 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 TDRD6O60522 2096 aaKnown RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 IGHV1OR21-1A0A087WYE8 117 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 DYRK3O43781 588 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 FMO6PO60774 539 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 LDB3O75112 727 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 OR5F1O95221 314 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 DCNP07585 359 aaKnown RBP15.27■□□□□ 0.03
LDB3-208ENST00000623007 CCNYL3P0C7X3 344 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 DCKP27707 260 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 ALDH4A1P30038 563 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 HOXD12P35452 270 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 KRT20P35900 424 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 MAP3K8P41279 467 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 CRISP1P54107 249 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 PSMD4P55036 377 aaKnown RBP15.27■□□□□ 0.03
LDB3-208ENST00000623007 TMBIM6P55061 237 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 TAS2R41P59536 307 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 SLC35A2P78381 396 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 POU6F2P78424 691 aaPredicted RBP15.27■□□□□ 0.03
LDB3-208ENST00000623007 FRRS1Q6ZNA5 592 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 PRSS48Q7RTY5 328 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 PRSS41Q7RTY9 318 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 DGLUCYQ7Z3D6 616 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 ERI1Q8IV48 349 aaKnown RBP15.27■□□□□ 0.03
LDB3-208ENST00000623007 OR4N5Q8IXE1 308 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 SPARTQ8N0X7 666 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 GALNT15Q8N3T1 639 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 OR5T3Q8NGG3 340 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 CDS1Q92903 461 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 DGAT2Q96PD7 388 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 SDF2Q99470 211 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 LMF2Q9BU23 707 aaKnown RBP15.27■□□□□ 0.03
LDB3-208ENST00000623007 PRRG3Q9BZD7 231 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 ADAP2Q9NPF8 381 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 PRMT8Q9NR22 394 aaPredicted RBP15.27■□□□□ 0.03
LDB3-208ENST00000623007 COL6A3P12111 3177 aa15.27■□□□□ 0.03
LDB3-208ENST00000623007 A0A0A6YYC8 382 aaPredicted RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 AGAP5A6NIR3 686 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 I3L1I5 382 aaPredicted RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 FOXS1O43638 330 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 RGS10O43665 173 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 PRAMEF2O60811 474 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 NME6O75414 186 aaPredicted RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 NKX2-2O95096 273 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 RPS4Y1P22090 263 aaKnown RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 RGS8P57771 180 aaPredicted RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 SQSTM1Q13501 440 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 DUSP5Q16690 384 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 DEFB110Q30KQ9 67 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 CYP27C1Q4G0S4 372 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 DCST2Q5T1A1 773 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 TYW3Q6IPR3 259 aaKnown RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 RRM2BQ7LG56 351 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 GPR135Q8IZ08 494 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 OR6T1Q8NGN1 323 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 RHOXF1Q8NHV9 184 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 FAM81AQ8TBF8 368 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 RIT1Q92963 219 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 NIPSNAP1Q9BPW8 284 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 FUZQ9BT04 418 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 TEX12Q9BXU0 123 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 NDOR1Q9UHB4 597 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 ZNF443Q9Y2A4 671 aaPredicted RBP15.26■□□□□ 0.03
LDB3-208ENST00000623007 CCDC88CQ9P219 2028 aa15.26■□□□□ 0.03
LDB3-208ENST00000623007 TRBV4-1A0A0J9YWV2 114 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 A0A1B0GVT2 93 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 A0A1W2PS29 197 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 ZAR1LA6NP61 321 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 FAM20BO75063 409 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 SEC14L2O76054 403 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 OR6B1O95007 311 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 GASTP01350 101 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 ACP2P11117 423 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 STT3AP46977 705 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 FNTBP49356 437 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 PDX1P52945 283 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 MGAT2Q10469 447 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 RAB39AQ14964 217 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 TRMT12Q53H54 448 aaKnown RBP15.25■□□□□ 0.03
LDB3-208ENST00000623007 PMS2CLQ68D20 193 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 C1orf94Q6P1W5 598 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms