RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 GABRA3P34903 492 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 TRHRP34981 398 aaPredicted RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 CLK3P49761 638 aaKnown RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 GPR143P51810 404 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 CDK6Q00534 326 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 CDC20Q12834 499 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 TRAP1Q12931 704 aaKnown RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 IL10RAQ13651 578 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 EBPQ15125 230 aaKnown RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 VMACQ2NL98 169 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 ARHGAP11BQ3KRB8 267 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 GTDC1Q4AE62 458 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 GPAT3Q53EU6 434 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 RABL3Q5HYI8 236 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 DCAF10Q5QP82 559 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 REEP3Q6NUK4 255 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 TNFAIP8L2Q6P589 184 aaPredicted RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 DGAT2L6Q6ZPD8 337 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 ASRGL1Q7L266 308 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 NET1Q7Z628 596 aaPredicted RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 PATL1Q86TB9 770 aaKnown RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 VASH2Q86V25 355 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 SLC44A2Q8IWA5 706 aaPredicted RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 MSRB3Q8IXL7 192 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 MICU2Q8IYU8 434 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 ZNF527Q8NB42 609 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 APCDD1LQ8NCL9 501 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 HIPK4Q8NE63 616 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 BBS10Q8TAM1 723 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 ELP5Q8TE02 316 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 SLC26A7Q8TE54 656 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 GIMAP5Q96F15 307 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 ZNF354BQ96LW1 612 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 RNF145Q96MT1 663 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 VSTM2LQ96N03 204 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 TRNT1Q96Q11 434 aaKnown RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 WDR77Q9BQA1 342 aaPredicted RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 WWTR1Q9GZV5 400 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 HOXD1Q9GZZ0 328 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 LHPPQ9H008 270 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 SLC6A13Q9NSD5 602 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 CBLCQ9ULV8 474 aa10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 GPR55Q9Y2T6 319 aaPredicted RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 YARS2Q9Y2Z4 477 aaKnown RBP10.24□□□□□ -0.77
SNORD3D-201ENST00000619178 A0A0G2JPF8 293 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 PRORSD1PA6NEY8 169 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 HNRNPCL2B2RXH8 293 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 HNRNPCL3B7ZW38 293 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 HMGN4O00479 90 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 SLC28A2O43868 658 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 HNRNPCL4P0DMR1 293 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 OR12D1P0DN82 309 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ARAFP10398 606 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ETFAP13804 333 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 PTGER1P34995 402 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 PCGF2P35227 344 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 EIF2S3P41091 472 aaKnown RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CASRP41180 1078 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 GSK3BP49841 420 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 EFNA3P52797 238 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 TMPRSS3P57727 454 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CHAF1BQ13112 559 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ATP1A4Q13733 1029 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 SCARB2Q14108 478 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 EFR3AQ14156 821 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ELOAQ14241 798 aaKnown RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 TRIM25Q14258 630 aaKnown RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 MEP1AQ16819 746 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ZSWIM7Q19AV6 140 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 PIGGQ5H8A4 983 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 OPN5Q6U736 354 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 LRRC74BQ6ZQY2 392 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 GPR155Q7Z3F1 870 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CALHM3Q86XJ0 350 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ULK2Q8IYT8 1036 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 SHISA5Q8N114 240 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 SLC34A3Q8N130 599 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CLEC4FQ8N1N0 589 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 HORMAD2Q8N7B1 307 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 SLC16A11Q8NCK7 471 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CHDHQ8NE62 594 aaPredicted RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 LZICQ8WZA0 190 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 HOXB13Q92826 284 aaPredicted RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CDS1Q92903 461 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ASB9Q96DX5 294 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 DTNBP1Q96EV8 351 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 NAF1Q96HR8 494 aaKnown RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ZNF583Q96ND8 569 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 YIPF4Q9BSR8 244 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ITPAQ9BY32 194 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CADM1Q9BY67 442 aaKnown RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 TRIM4Q9C037 500 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 EVA1AQ9H8M9 152 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 CMTM6Q9NX76 183 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 RPS6KA6Q9UK32 745 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ZNF232Q9UNY5 417 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 SNX13Q9Y5W8 968 aa10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 MRPS18BQ9Y676 258 aaKnown RBP10.23□□□□□ -0.77
SNORD3D-201ENST00000619178 ACACAQ13085 2346 aa10.22□□□□□ -0.77
SNORD3D-201ENST00000619178 A8MVJ9 347 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms