RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ADH1AP07327 375 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 CELP19835 753 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 SSR2P43308 183 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 GZMKP49863 264 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 ZNF155Q12901 538 aaPredicted RBP19.16■□□□□ 0.66
NEK3-208ENST00000618534 WSCD2Q2TBF2 565 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 ZNF750Q32MQ0 723 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 ZNF791Q3KP31 576 aaPredicted RBP19.16■□□□□ 0.66
NEK3-208ENST00000618534 SLC30A6Q6NXT4 461 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 ZNF793Q6ZN11 406 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 AMZ2Q86W34 360 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 C12orf40Q86WS4 652 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 LIX1LQ8IVB5 337 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 SLAIN1Q8ND83 568 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 OR5K2Q8NHB8 316 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 NEIL3Q8TAT5 605 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 ZSWIM3Q96MP5 696 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 TMEM43Q9BTV4 400 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 MENTQ9BUN1 341 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 AICDAQ9GZX7 198 aa19.16■□□□□ 0.66
NEK3-208ENST00000618534 GPR55Q9Y2T6 319 aaPredicted RBP19.16■□□□□ 0.66
NEK3-208ENST00000618534 HEATR5BQ9P2D3 2071 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 CPSF4LA6NMK7 179 aaKnown RBP19.15■□□□□ 0.66
NEK3-208ENST00000618534 HMGN2P05204 90 aaKnown RBP19.15■□□□□ 0.66
NEK3-208ENST00000618534 PPM1AP35813 382 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 DPTQ07507 201 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 TSPAN31Q12999 210 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 TCEAL5Q5H9L2 206 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 FAM46CQ5VWP2 391 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 TIGD3Q6B0B8 471 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 LYPD8Q6UX82 237 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 POGLUT1Q8NBL1 392 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 BBS4Q96RK4 519 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 SEMA4GQ9NTN9 838 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 ADAM29Q9UKF5 820 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 LOC102723532A0A0G2JNH3 316 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 C2orf92A0A1B0GVN3 265 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 CD8B2A6NJW9 211 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 CASC3O15234 703 aaKnown RBP19.15■□□□□ 0.66
NEK3-208ENST00000618534 ZNF780AO75290 641 aaPredicted RBP19.15■□□□□ 0.66
NEK3-208ENST00000618534 ERAL1O75616 437 aaKnown RBP19.15■□□□□ 0.66
NEK3-208ENST00000618534 CISD3P0C7P0 127 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 CD8BP10966 210 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 GNSP15586 552 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 HTR2BP41595 481 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 IL12RB1P42701 662 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 CLDN20P56880 219 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 TAS2R38P59533 333 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 ARHGAP19Q14CB8 494 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 KIAA1161Q6NSJ0 714 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 METAP1DQ6UB28 335 aaPredicted RBP19.15■□□□□ 0.66
NEK3-208ENST00000618534 ADCK2Q7Z695 626 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 OR4Q3Q8NH05 313 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 C16orf58Q96GQ5 468 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 PINK1Q9BXM7 581 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 RNF32Q9H0A6 362 aa19.15■□□□□ 0.66
NEK3-208ENST00000618534 ACP5P13686 325 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 NTSP30990 170 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 TRIM23P36406 574 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 NTHL1P78549 312 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 DUSP2Q05923 314 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 ARHGAP15Q53QZ3 475 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 RASSF6Q6ZTQ3 369 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 LSRQ86X29 649 aaPredicted RBP19.14■□□□□ 0.66
NEK3-208ENST00000618534 LIPT1Q9Y234 373 aa19.14■□□□□ 0.66
NEK3-208ENST00000618534 SMLR1H3BR10 107 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 DVL2O14641 736 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 TRIM3O75382 744 aaPredicted RBP19.14■□□□□ 0.65
NEK3-208ENST00000618534 HLA-DPB1P04440 258 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 RHOP08100 348 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 ADRB3P13945 408 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 DDX6P26196 483 aaKnown RBP eCLIP19.14■□□□□ 0.65
NEK3-208ENST00000618534 CTBP2P56545 445 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 VASNQ6EMK4 673 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 BBS1Q8NFJ9 593 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 SPRYD4Q8WW59 207 aaPredicted RBP19.14■□□□□ 0.65
NEK3-208ENST00000618534 NXPE3Q969Y0 559 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 GFM1Q96RP9 751 aaKnown RBP19.14■□□□□ 0.65
NEK3-208ENST00000618534 MACROD1Q9BQ69 325 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 ZNF649Q9BS31 505 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 IRF2BPLQ9H1B7 796 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 TRIM45Q9H8W5 580 aaPredicted RBP19.14■□□□□ 0.65
NEK3-208ENST00000618534 TMEM39AQ9NV64 488 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 MCUBQ9NWR8 336 aa19.14■□□□□ 0.65
NEK3-208ENST00000618534 A0A0G2JPF8 293 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 ISM1B1AKI9 464 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 HNRNPCL2B2RXH8 293 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 HNRNPCL3B7ZW38 293 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 MAN2B1O00754 1011 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 C1QBP02746 253 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 HNRNPCL4P0DMR1 293 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 DRD2P14416 443 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 IFNGR2P38484 337 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 OMPP47874 163 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 CSNK1G2P78368 415 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 ABATP80404 500 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 RPA4Q13156 261 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 DHCR24Q15392 516 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 ZNF311Q5JNZ3 666 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 AADACL4Q5VUY2 407 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms