RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CBR1P16152 277 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 PRKACBP22694 351 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 HOXA9P31269 272 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SLC22A10Q63ZE4 541 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 KIAA0895LQ68EN5 471 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 TANGO2Q6ICL3 276 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 ZNF705AQ6ZN79 300 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 LARP4Q71RC2 724 aaKnown RBP eCLIP5.72□□□□□ -1.49
RFX3-212ENST00000617270 TMEM173Q86WV6 379 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 SKA3Q8IX90 412 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 LIPHQ8WWY8 451 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SPIN2AQ99865 258 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SPIN2BQ9BPZ2 258 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 CWH43Q9H720 699 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 NWD1Q149M9 1564 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 WASH4PA8MWX3 477 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 H3BML4 177 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 RTCAO00442 366 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 PHYHO14832 338 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 EMC8O43402 210 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 CAPNS1P04632 268 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 BMP4P12644 408 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SSTR4P31391 388 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SFTPDP35247 375 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 BMXP51813 675 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SEC61A1P61619 476 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 SFRP5Q5T4F7 317 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 ZNF767PQ75MW2 155 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 MRPL21Q7Z2W9 205 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 BPHLQ86WA6 291 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 OR8J1Q8NGP2 316 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 DAZLQ92904 295 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 FAM234AQ9H0X4 552 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 MMP28Q9H239 520 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 TCEAL2Q9H3H9 227 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 SMCO4Q9NRQ5 59 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 VSX1Q9NZR4 365 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 CA5BQ9Y2D0 317 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 PUS1Q9Y606 427 aaKnown RBP eCLIP5.72□□□□□ -1.49
RFX3-212ENST00000617270 URB1O60287 2271 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 WNT7AO00755 349 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SPHARQ15513 63 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 COQ5Q5HYK3 327 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 METTL2BQ6P1Q9 378 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 TEX26Q8N6G2 289 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 CSNK1A1LQ8N752 337 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 DBF4BQ8NFT6 615 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 RNF128Q8TEB7 428 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 FUBP3Q96I24 572 aaKnown RBP eCLIP5.72□□□□□ -1.49
RFX3-212ENST00000617270 SGIP1Q9BQI5 828 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 GPR88Q9GZN0 384 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SLC38A1Q9H2H9 487 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 FBXO7Q9Y3I1 522 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 MAGED1Q9Y5V3 778 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 CAMSAP1Q5T5Y3 1602 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 TET3O43151 1660 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 FAM159BA6NKW6 160 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 POM121CA8CG34 1229 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 ZNF736B4DX44 427 aaPredicted RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 PRAMEF2O60811 474 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 IL1AP01583 271 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 TAS2R30P59541 319 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 RPL26P61254 145 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 SF3A2Q15428 464 aaKnown RBP5.72□□□□□ -1.49
RFX3-212ENST00000617270 TIGD3Q6B0B8 471 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 CDHR3Q6ZTQ4 885 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 NRMQ8IXM6 262 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 SNAPC3Q92966 411 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 LGALS12Q96DT0 336 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 LRIG1Q96JA1 1093 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 MRI1Q9BV20 369 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 RNF32Q9H0A6 362 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 PTGDR2Q9Y5Y4 395 aa5.72□□□□□ -1.49
RFX3-212ENST00000617270 C20orf202A1L168 122 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 H0YAE9 185 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 DUX1O43812 170 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 CSF1P09603 554 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 SSTR2P30874 369 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 GAB1Q13480 694 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 PCLAFQ15004 111 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 YIF1BQ5BJH7 314 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 C3orf38Q5JPI3 329 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 DRICH1Q6PGQ1 229 aaPredicted RBP5.71□□□□□ -1.49
RFX3-212ENST00000617270 ENPP6Q6UWR7 440 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 FBXW12Q6X9E4 464 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 MAMDC2Q7Z304 686 aaPredicted RBP5.71□□□□□ -1.49
RFX3-212ENST00000617270 OR1J4Q8NGS1 313 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 KIAA1191Q96A73 305 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 MSI2Q96DH6 328 aaKnown RBP5.71□□□□□ -1.49
RFX3-212ENST00000617270 CCNL2Q96S94 520 aaPredicted RBP5.71□□□□□ -1.49
RFX3-212ENST00000617270 MFFQ9GZY8 342 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 HRH4Q9H3N8 390 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 CLTCL1P53675 1640 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 NRXN1Q9ULB1 1477 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 WTIPA6NIX2 430 aaPredicted RBP5.71□□□□□ -1.49
RFX3-212ENST00000617270 OR7A17O14581 309 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 SCAF4O95104 1147 aaKnown RBP5.71□□□□□ -1.49
RFX3-212ENST00000617270 SNAPINO95295 136 aa5.71□□□□□ -1.49
RFX3-212ENST00000617270 CRYZL1O95825 349 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms