RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CSNK1A1LQ8N752 337 aa17.92■□□□□ 0.46
MMP28-204ENST00000615136 OR56A1Q8NGH5 318 aa17.92■□□□□ 0.46
MMP28-204ENST00000615136 ZNF607Q96SK3 696 aa17.92■□□□□ 0.46
MMP28-204ENST00000615136 CNOT2Q9NZN8 540 aaKnown RBP17.92■□□□□ 0.46
MMP28-204ENST00000615136 SLC6A14Q9UN76 642 aa17.92■□□□□ 0.46
MMP28-204ENST00000615136 MRPS17Q9Y2R5 130 aaKnown RBP17.92■□□□□ 0.46
MMP28-204ENST00000615136 SDK1Q7Z5N4 2213 aa17.92■□□□□ 0.46
MMP28-204ENST00000615136 M0R129 80 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 M0R3H8 397 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 TLR4O00206 839 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 AIREO43918 545 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 LDB3O75112 727 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 BMP4P12644 408 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 BCKDHBP21953 392 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 TGFBR1P36897 503 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 RELAQ04206 551 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 ST3GAL4Q11206 333 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.91■□□□□ 0.46
MMP28-204ENST00000615136 AVL9Q8NBF6 648 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 C9orf43Q8TAL5 461 aaPredicted RBP17.91■□□□□ 0.46
MMP28-204ENST00000615136 SNRNP27Q8WVK2 155 aaKnown RBP17.91■□□□□ 0.46
MMP28-204ENST00000615136 ZG16BQ96DA0 208 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 HSPA12BQ96MM6 686 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 DACH2Q96NX9 599 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 DCSTAMPQ9H295 470 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 PRDM6Q9NQX0 595 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 MS4A12Q9NXJ0 267 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 WNT16Q9UBV4 365 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 NDOR1Q9UHB4 597 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 PHF11Q9UIL8 331 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 EFCAB10A6NFE3 127 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 URADA6NGE7 173 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 FAAHO00519 579 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 SDC3O75056 442 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 PTHP01270 115 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 HNRNPCP07910 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
MMP28-204ENST00000615136 SPTBP11277 2137 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 PSMD7P51665 324 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 DEF8Q6ZN54 512 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 LRRC25Q8N386 305 aaPredicted RBP17.91■□□□□ 0.46
MMP28-204ENST00000615136 B3GNT7Q8NFL0 401 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 OR4K14Q8NGD5 310 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 CRELD1Q96HD1 420 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 MROQ9BYG7 248 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 ROGDIQ9GZN7 287 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 CHRDQ9H2X0 955 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 DNAAF2Q9NVR5 837 aaKnown RBP17.91■□□□□ 0.46
MMP28-204ENST00000615136 REV1Q9UBZ9 1251 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 TMCC3Q9ULS5 477 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 MGAT4BQ9UQ53 548 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 EML5Q05BV3 1969 aa17.91■□□□□ 0.46
MMP28-204ENST00000615136 CEP192Q8TEP8 1941 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 SPAG17Q6Q759 2223 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 SLC9B1P1A6NJY1 282 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 SGK494L7N484 410 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 MED26O95402 600 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 ZIC2O95409 532 aaPredicted RBP17.9■□□□□ 0.46
MMP28-204ENST00000615136 OSMP13725 252 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 GADD45AP24522 165 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 CNR2P34972 360 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 MAGEA8P43361 318 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 CLK1P49759 484 aaKnown RBP17.9■□□□□ 0.46
MMP28-204ENST00000615136 CRISP3P54108 245 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 PRR5P85299 388 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 SHC2P98077 582 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 SRSF5Q13243 272 aaKnown RBP17.9■□□□□ 0.46
MMP28-204ENST00000615136 SEC23BQ15437 767 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 GPAT3Q53EU6 434 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 NIPAL1Q6NVV3 410 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 ZNF367Q7RTV3 350 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 NLGN4XQ8N0W4 816 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 FUZQ9BT04 418 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 CDCA4Q9BXL8 241 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 SEMA6CQ9H3T2 930 aa17.9■□□□□ 0.46
MMP28-204ENST00000615136 ZBTB20Q9HC78 741 aaPredicted RBP17.9■□□□□ 0.46
MMP28-204ENST00000615136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 FUOMA2VDF0 154 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 TMEM247A6NEH6 219 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 CYR61O00622 381 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 KPNA4O00629 521 aaPredicted RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 ZSCAN9O15535 394 aaPredicted RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 FGF17O60258 216 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 GALR3O60755 368 aaPredicted RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 UBXN7O94888 489 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 H1F0P07305 194 aaKnown RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 PIPP12273 146 aaPredicted RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 CDH3P22223 829 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 LIMK1P53667 647 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 RACK1P63244 317 aaKnown RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 OXA1LQ15070 435 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 INAQ16352 499 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 DEFB133Q30KQ1 61 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 TRMT12Q53H54 448 aaKnown RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 BHLHB9Q6PI77 547 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 LSRQ86X29 649 aaPredicted RBP17.89■□□□□ 0.46
MMP28-204ENST00000615136 SLC16A11Q8NCK7 471 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 C1orf216Q8TAB5 229 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 MOAP1Q96BY2 351 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 SLC35A4Q96G79 324 aa17.89■□□□□ 0.46
MMP28-204ENST00000615136 UCK2Q9BZX2 261 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms