RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TO15178 435 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 THBDP07204 575 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 ALDH18A1P54886 795 aaKnown RBP21.14■□□□□ 0.97
MMP28-203ENST00000612672 ANKRD34AQ69YU3 496 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 CYS1Q717R9 158 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 UBQLNLQ8IYU4 475 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 RHEBL1Q8TAI7 183 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 CNRIP1Q96F85 164 aaPredicted RBP21.14■□□□□ 0.97
MMP28-203ENST00000612672 GPR78Q96P69 363 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 NOL11Q9H8H0 719 aaKnown RBP21.14■□□□□ 0.97
MMP28-203ENST00000612672 ZNF226Q9NYT6 803 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 NBEAL1Q6ZS30 2694 aa21.14■□□□□ 0.97
MMP28-203ENST00000612672 OR6C70A6NIJ9 312 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 SLC22A20A6NK97 555 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 TSPAN2O60636 221 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 ERAL1O75616 437 aaKnown RBP21.13■□□□□ 0.97
MMP28-203ENST00000612672 POU2F1P14859 743 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 CRABP2P29373 138 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 PPICP45877 212 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 SUCLG1P53597 346 aaKnown RBP21.13■□□□□ 0.97
MMP28-203ENST00000612672 NR1H2P55055 460 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 CORO7P57737 925 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 AAGABQ6PD74 315 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 NPSR1Q6W5P4 371 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 P4HA3Q7Z4N8 544 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 METTL4Q8N3J2 472 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 SLC35A4Q96G79 324 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 ZNF681Q96N22 645 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 NSUN5Q96P11 429 aaKnown RBP21.13■□□□□ 0.97
MMP28-203ENST00000612672 COL21A1Q96P44 957 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 GRHL1Q9NZI5 618 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 DKKL1Q9UK85 242 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 GPR55Q9Y2T6 319 aaPredicted RBP21.13■□□□□ 0.97
MMP28-203ENST00000612672 ABCA1O95477 2261 aa21.13■□□□□ 0.97
MMP28-203ENST00000612672 FRG2CA6NGY1 282 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 SYCE1LA8MT33 242 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CRLF1O75462 422 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CLDN9O95484 217 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 PLAUP00749 431 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CRHP06850 196 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CT45A8P0DMV1 189 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CT45A9P0DMV2 189 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 DRD5P21918 477 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 GRK2P25098 689 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 GALNT1Q10472 559 aaPredicted RBP21.12■□□□□ 0.97
MMP28-203ENST00000612672 TRAF3Q13114 568 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 GUSBP1Q15486 140 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CT45A2Q5DJT8 189 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CCNYL2Q5T2Q4 361 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 COMMD6Q7Z4G1 85 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 ZNF610Q8N9Z0 462 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 MAPK1IP1LQ8NDC0 245 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 ADOQ96SZ5 270 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 ZBTB26Q9HCK0 441 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 FARSBQ9NSD9 589 aaKnown RBP21.12■□□□□ 0.97
MMP28-203ENST00000612672 CPSF2Q9P2I0 782 aaKnown RBP21.12■□□□□ 0.97
MMP28-203ENST00000612672 ADAM29Q9UKF5 820 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 CFL2Q9Y281 166 aa21.12■□□□□ 0.97
MMP28-203ENST00000612672 REM1O75628 298 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 C2P06681 752 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 DPP4P27487 766 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 MAPK12P53778 367 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 EEF1A1P68104 462 aaKnown RBP21.11■□□□□ 0.97
MMP28-203ENST00000612672 EEF1A1P5Q5VTE0 462 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 FRG2Q64ET8 278 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 RPS27LQ71UM5 84 aaKnown RBP21.11■□□□□ 0.97
MMP28-203ENST00000612672 TM4SF18Q96CE8 201 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 KLHL29Q96CT2 875 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 FRG2BQ96QU4 278 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 ACOT9Q9Y305 439 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 MRPS18CQ9Y3D5 142 aaKnown RBP21.11■□□□□ 0.97
MMP28-203ENST00000612672 SVEP1Q4LDE5 3571 aa21.11■□□□□ 0.97
MMP28-203ENST00000612672 C1orf226A1L170 272 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 EIF3HO15372 352 aaKnown RBP eCLIP21.1■□□□□ 0.97
MMP28-203ENST00000612672 SOX30O94993 753 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 PAX1P15863 534 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 ZNF628Q5EBL2 1059 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 SCIMPQ6UWF3 145 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 OR4N2Q8NGD1 307 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 OR5M1Q8NGP8 315 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 FNDC9Q8TBE3 224 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 FBF1Q8TES7 1133 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 ZNF845Q96IR2 970 aaPredicted RBP21.1■□□□□ 0.97
MMP28-203ENST00000612672 BTBD9Q96Q07 612 aa21.1■□□□□ 0.97
MMP28-203ENST00000612672 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.09■□□□□ 0.97
MMP28-203ENST00000612672 GOLGA6L10A6NI86 522 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 C16orf97H3BN30 126 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 KLF4O43474 513 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 CSNK2A2P19784 350 aaPredicted RBP21.09■□□□□ 0.97
MMP28-203ENST00000612672 CLDN20P56880 219 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 TNK1Q13470 666 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 BCL2A1Q16548 175 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 SGO1Q5FBB7 561 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 TECRLQ5HYJ1 363 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 OR2A2Q6IF42 318 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 PLEKHM3Q6ZWE6 761 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 PLD6Q8N2A8 252 aaKnown RBP21.09■□□□□ 0.97
MMP28-203ENST00000612672 PTGR2Q8N8N7 351 aaPredicted RBP21.09■□□□□ 0.97
MMP28-203ENST00000612672 FADS6Q8N9I5 356 aa21.09■□□□□ 0.97
MMP28-203ENST00000612672 TMCO6Q96DC7 493 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms