RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 MDC1Q14676 2089 aaKnown RBP16.17■□□□□ 0.18
NEK3-206ENST00000611833 IRGMA1A4Y4 181 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 SYT5O00445 386 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 PLD2O14939 933 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 PROM1O43490 865 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 ASGR2P07307 311 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 CCNYL3P0C7X3 344 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 ACP2P11117 423 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 MAT2AP31153 395 aaKnown RBP16.17■□□□□ 0.18
NEK3-206ENST00000611833 RAB40BQ12829 278 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 MAP4K2Q12851 820 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 LARS2Q15031 903 aaKnown RBP16.17■□□□□ 0.18
NEK3-206ENST00000611833 RPE65Q16518 533 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 C22orf42Q6IC83 251 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 KAT2AQ92830 837 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 ELP4Q96EB1 424 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 SLC38A1Q9H2H9 487 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 MTIF3Q9H2K0 278 aaKnown RBP16.17■□□□□ 0.18
NEK3-206ENST00000611833 CNIH4Q9P003 139 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 APOBEC3BQ9UH17 382 aaKnown RBP16.17■□□□□ 0.18
NEK3-206ENST00000611833 GPR55Q9Y2T6 319 aaPredicted RBP16.17■□□□□ 0.18
NEK3-206ENST00000611833 CMAHPQ9Y471 501 aa16.17■□□□□ 0.18
NEK3-206ENST00000611833 SSX4O60224 188 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 GDI1P31150 447 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 CASP3P42574 277 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 AVPR1BP47901 424 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ERVK-21P61565 698 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 STXBP1P61764 594 aaKnown RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 PSPHP78330 225 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 BTN3A2P78410 334 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ST3GAL3Q11203 375 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 TJAP1Q5JTD0 557 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 CLEC12AQ5QGZ9 265 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 OR2G6Q5TZ20 316 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ZNF776Q68DI1 518 aaPredicted RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 GJD3Q8N144 294 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 MFSD9Q8NBP5 474 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 GATAD2BQ8WXI9 593 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 NR4A3Q92570 626 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 SLC25A46Q96AG3 418 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 C1GALT1C1Q96EU7 318 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 FAM46AQ96IP4 442 aaKnown RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 IGFLR1Q9H665 355 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 SEMA4GQ9NTN9 838 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 CALML5Q9NZT1 146 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 LIPT1Q9Y234 373 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 H3BQ06 376 aaPredicted RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 DYRK3O43781 588 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 KCNJ13O60928 360 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 UBXN7O94888 489 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 AZGP1P25311 298 aaKnown RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 MTNR1AP48039 350 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ARFIP1P53367 373 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 TSPAN31Q12999 210 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 LRIT3Q3SXY7 679 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ZMAT1Q5H9K5 638 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ARMC4Q5T2S8 1044 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 MTSS1LQ765P7 747 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 FGF11Q92914 225 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 EFHD2Q96C19 240 aaPredicted RBP16.16■□□□□ 0.18
NEK3-206ENST00000611833 OR2A14Q96R47 310 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 ARHGDIGQ99819 225 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 PRRG3Q9BZD7 231 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 KLHL28Q9NXS3 571 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 MUTYHQ9UIF7 546 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 POU2F3Q9UKI9 436 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 TBC1D24Q9ULP9 559 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 SNX7Q9UNH6 387 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 V9GYH0 126 aa16.16■□□□□ 0.18
NEK3-206ENST00000611833 IQCMA0A1B0GVH7 501 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 PLRG1O43660 514 aaKnown RBP16.15■□□□□ 0.18
NEK3-206ENST00000611833 IL1AP01583 271 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 KIR2DL1P43626 348 aaPredicted RBP16.15■□□□□ 0.18
NEK3-206ENST00000611833 TSFMP43897 325 aaKnown RBP16.15■□□□□ 0.18
NEK3-206ENST00000611833 BNC1Q01954 994 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 NRROSQ86YC3 692 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 ANKK1Q8NFD2 765 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 IL17RDQ8NFM7 739 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 OR4E2Q8NGC2 313 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 OR8D4Q8NGM9 314 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 PIGXQ8TBF5 258 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 RPP25Q9BUL9 199 aaKnown RBP16.15■□□□□ 0.18
NEK3-206ENST00000611833 APOOQ9BUR5 198 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 SARGQ9BW04 601 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 TRIM45Q9H8W5 580 aaPredicted RBP16.15■□□□□ 0.18
NEK3-206ENST00000611833 FGF22Q9HCT0 170 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 TOR4AQ9NXH8 423 aa16.15■□□□□ 0.18
NEK3-206ENST00000611833 K7EQS6 105 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 RNGTTO60942 597 aaKnown RBP16.14■□□□□ 0.18
NEK3-206ENST00000611833 NTN1O95631 604 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 EN2P19622 333 aaPredicted RBP16.14■□□□□ 0.18
NEK3-206ENST00000611833 COPZ1P61923 177 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 HOXC5Q00444 222 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 HNRNPA0Q13151 305 aaKnown RBP16.14■□□□□ 0.18
NEK3-206ENST00000611833 TCEA2Q15560 299 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 LTB4RQ15722 352 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 MINDY4Q4G0A6 757 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 FLYWCH1Q4VC44 716 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms