RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ATG4BQ9Y4P1 393 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PLXNB2O15031 1838 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 RIF1Q5UIP0 2472 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CACNA1EQ15878 2313 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 FABP12A6NFH5 140 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SLC1A7O00341 560 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TNFRSF21O75509 655 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 OTX2P32243 289 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 POLR2IP36954 125 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 BCL6P41182 706 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 DPP6P42658 865 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 MAP4K2Q12851 820 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PMS2P3Q13401 168 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SERTAD2Q14140 314 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CLCA4Q14CN2 919 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 NKAIN2Q5VXU1 208 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM225Q6GV28 225 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 OLIG3Q7RTU3 272 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SFTPA1Q8IWL2 248 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 EID2Q8N6I1 236 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 OR52R1Q8NGF1 315 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 OR51L1Q8NGJ5 315 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 NEK7Q8TDX7 302 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 DIO2Q92813 273 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GPR83Q9NYM4 423 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 DHCR7Q9UBM7 475 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GNG8Q9UK08 70 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CROCCQ5TZA2 2017 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PLPP1O14494 284 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CDRT1O95170 752 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PLGP00747 810 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PRKAR1AP10644 381 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 STAT5AP42229 794 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SLC6A9P48067 706 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 HLCSP50747 726 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 AFF3P51826 1226 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 LTB4RQ15722 352 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 AGBL4Q5VU57 503 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 LIPKQ5VXJ0 399 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CBLL1Q75N03 491 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 MFSD9Q8NBP5 474 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF675Q8TD23 568 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM234Q8WY98 164 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 ATOH1Q92858 354 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SLC41A3Q96GZ6 507 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 ADOQ96SZ5 270 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CXorf36Q9H7Y0 433 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 ANKRA2Q9H9E1 313 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TRIM36Q9NQ86 728 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CNOT11Q9UKZ1 510 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GPC6Q9Y625 555 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PRAMEF33A0A0G2JMD5 474 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TRAPPC13A5PLN9 417 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 UNC119BA6NIH7 251 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 H0YJX3 145 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 J3KTA2 159 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TP53I11O14683 189 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 FOXD2O60548 495 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TRIM3O75382 744 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CLPXO76031 633 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 ADAP00813 363 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CPMP14384 443 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SLC6A12P48065 614 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 RORCP51449 518 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 EMP2P54851 167 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TXNL4AP83876 142 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CHRNEQ04844 493 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GK3PQ14409 553 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GBX1Q14549 363 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 MICAQ29983 383 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PUS10Q3MIT2 529 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 COX20Q5RI15 118 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GTF2IRD2BQ6EKJ0 949 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 SHFQ7M4L6 423 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GTF2IRD2Q86UP8 949 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TSPYL5Q86VY4 417 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 GALNT15Q8N3T1 639 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 OR6N2Q8NGY6 317 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 RSC1A1Q92681 617 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TBC1D20Q96BZ9 403 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 C1QTNF2Q9BXJ5 285 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 DPH1Q9BZG8 443 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 KIR3DX1Q9H7L2 352 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 TUBA8Q9NY65 449 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-218ENST00000610726 PPP4R1LQ9P1A2 415 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 CEP250Q9BV73 2442 aa6.86□□□□□ -1.31
CSDE1-218ENST00000610726 AP1G1O43747 822 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 HLA-DPB1P04440 258 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 TACSTD2P09758 323 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 EPHA5P54756 1037 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 TRA2BP62995 288 aaKnown RBP6.85□□□□□ -1.31
CSDE1-218ENST00000610726 PPP3R1P63098 170 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 RACK1P63244 317 aaKnown RBP6.85□□□□□ -1.31
CSDE1-218ENST00000610726 REEP5Q00765 189 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 DSG2Q14126 1118 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 BTBD16Q32M84 506 aa6.85□□□□□ -1.31
CSDE1-218ENST00000610726 HSF5Q4G112 596 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-218ENST00000610726 MEDAGQ5VYS4 303 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms