RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 INTS6Q9UL03 887 aaKnown RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 OR7A17O14581 309 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 F11P03951 625 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 H2BFMP0C1H6 154 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 RORAP35398 523 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 ACTA2P62736 377 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 ACTG2P63267 376 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 NSDHLQ15738 373 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 P4HA3Q7Z4N8 544 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CDRT4Q8N9R6 151 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 ANKK1Q8NFD2 765 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 LRRC20Q8TCA0 184 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 ADAMTS18Q8TE60 1221 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 FCAMRQ8WWV6 532 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 FAM3CQ92520 227 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 SCGB3A2Q96PL1 93 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 ABCG2Q9UNQ0 655 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CCL26Q9Y258 94 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 IGLV3-10A0A075B6K4 115 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 HMX2A2RU54 273 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 MTRF1O75570 445 aaKnown RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CLEC3AO75596 197 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 RGS9O75916 674 aaPredicted RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 TSPAN9O75954 239 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 KDM4BO94953 1096 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 PROS1P07225 676 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 DPH1Q9BZG8 443 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 SLC6A15Q9H2J7 730 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 KLF15Q9UIH9 416 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 HTR3EA5X5Y0 456 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CCNOP22674 350 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 Q6ZSR6 202 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 PLCZ1Q86YW0 608 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 FOXRED2Q8IWF2 684 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 SPARTQ8N0X7 666 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 OR2T11Q8NH01 316 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 RPLP0P6Q8NHW5 317 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 WDR77Q9BQA1 342 aaPredicted RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 WASHC1A8K0Z3 465 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 TMEM69Q5SWH9 247 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 WASH2PQ6VEQ5 465 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF852Q6ZMS4 543 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 MNTQ99583 582 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CDCA3Q99618 268 aaPredicted RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 NUDT15Q9NV35 164 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CUEDC1Q9NWM3 386 aaPredicted RBP13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 SCP2D1Q9UJQ7 156 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 CLEC4EQ9ULY5 219 aa13.49□□□□□ -0.25
PCDHB16-201ENST00000609684 GLI3P10071 1580 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 L7N2F9 121 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 GABBR2O75899 941 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 JMJD7P0C870 316 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 GSTT2P0CG29 244 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 GBX1Q14549 363 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 TCTE1Q5JU00 501 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 LRFN4Q6PJG9 635 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PLXDC1Q8IUK5 500 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 GAL3ST3Q96A11 431 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ENTPD2Q9Y5L3 495 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 UBFD1O14562 309 aaKnown RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PCDH17O14917 1159 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PRAMEF2O60811 474 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PPP5CP53041 499 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PSMA6P60900 246 aaKnown RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 HBA1P69905 142 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 RTN4RL1Q86UN2 441 aaPredicted RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 OR51L1Q8NGJ5 315 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 NDNFQ8TB73 568 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 SH2B3Q9UQQ2 575 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PCDHA9Q9Y5H5 950 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 TEX46H3BTG2 121 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 RDH16O75452 317 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 IFNA21P01568 189 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 GGT2P36268 569 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ARPC4P59998 168 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ANKRD13BQ86YJ7 626 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 CPOQ8IVL8 374 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 MFSD6LQ8IWD5 586 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 PINK1Q9BXM7 581 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 DHDHQ9UQ10 334 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 MYO5AQ9Y4I1 1855 aaKnown RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 S100A6P06703 90 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 DRD1P21728 446 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 SOX9P48436 509 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ERVFC1P60507 584 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 EIF5AP63241 154 aaKnown RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 KIR2DS3Q14952 304 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 SLC5A12Q1EHB4 618 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms