RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PACS2Q86VP3 889 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 OR4N2Q8NGD1 307 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 OR5M9Q8NGP3 310 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 ZFP28Q8NHY6 868 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 NUDT8Q8WV74 236 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 HGDQ93099 445 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 ELP4Q96EB1 424 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 VSTM2LQ96N03 204 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 BTBD9Q96Q07 612 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 ADOQ96SZ5 270 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 SECISBP2Q96T21 854 aaKnown RBP13.21□□□□□ -0.29
TUBE1-208ENST00000604743 SORT1Q99523 831 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 ANGPTL4Q9BY76 406 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 ZNF703Q9H7S9 590 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-208ENST00000604743 EQTNQ9NQ60 294 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 KLRF1Q9NZS2 232 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 B4GALT7Q9UBV7 327 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 C19orf53Q9UNZ5 99 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-208ENST00000604743 RAP2CQ9Y3L5 183 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 PHF3Q92576 2039 aaKnown RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 A0A087WV62 115 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 TRGV5A0A0B4J1U4 118 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 PLOD2O00469 737 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 TO15178 435 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 TRIM3O75382 744 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 SLITRK5O94991 958 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 SNX4O95219 450 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 HPCAL1P37235 193 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 RFX3P48380 749 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 CDK9P50750 372 aaKnown RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 PRKAG1P54619 331 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 WDR4P57081 412 aaKnown RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 ADORA2A-AS1P86434 159 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 BST1Q10588 318 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 PDE7AQ13946 482 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 LARP4Q71RC2 724 aaKnown RBP eCLIP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 R3HCC1LQ7Z5L2 792 aaKnown RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 OR2L13Q8N349 312 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 OR7A2PQ8NGA2 310 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 ITLN2Q8WWU7 325 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 EFHD2Q96C19 240 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 ZBED6CLQ96FA7 236 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 OSBPL11Q9BXB4 747 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 SLC6A15Q9H2J7 730 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 GALNT9Q9HCQ5 603 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 PNPOQ9NVS9 261 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 NKIRAS1Q9NYS0 192 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 EIF3LQ9Y262 564 aaKnown RBP13.2□□□□□ -0.3
TUBE1-208ENST00000604743 HRH3Q9Y5N1 445 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
TUBE1-208ENST00000604743 PRAMEF25A6NGN4 478 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 SCAMP2O15127 329 aaKnown RBP13.19□□□□□ -0.3
TUBE1-208ENST00000604743 TBX19O60806 448 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 ICOSLGO75144 302 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 IGHG3P01860 377 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 PRPS2P11908 318 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 SMSP52788 366 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 PSG6Q00889 435 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 ZNHIT3Q15649 155 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-208ENST00000604743 GXYLT1Q4G148 440 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 ANGPTL8Q6UXH0 198 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 TMCO6Q96DC7 493 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 MTERF3Q96E29 417 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 TMEM41AQ96HV5 264 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 NUF2Q9BZD4 464 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 PNPLA3Q9NST1 481 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 ATP6V1HQ9UI12 483 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-208ENST00000604743 CACNA1DQ01668 2161 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 MED12Q93074 2177 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 CACNA1CQ13936 2221 aa13.19□□□□□ -0.3
TUBE1-208ENST00000604743 PCNX3Q9H6A9 2034 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 A0A1B0GVC2 190 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 OR6C70A6NIJ9 312 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 PRSS44E7EML9 344 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 E9PLN8 166 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 AQP7O14520 342 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 ADAM10O14672 748 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 SUSD5O60279 629 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 TSPAN2O60636 221 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 LAMP1P11279 417 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 G6PDP11413 515 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 DDX5P17844 614 aaKnown RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 RPL3P39023 403 aaKnown RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 PTGDSP41222 190 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 MAD2L1Q13257 205 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 GAB1Q13480 694 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 EFR3AQ14156 821 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 EMC4Q5J8M3 183 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 CPTPQ5TA50 214 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms