RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SASH3O75995 380 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 EPPINO95925 133 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 HSD3B1P14060 373 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 NAGAP17050 411 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 BGNP21810 368 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 HSD3B2P26439 372 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 UQCRC1P31930 480 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 TRA2BP62995 288 aaKnown RBP17.11■□□□□ 0.33
PNKP-213ENST00000599543 MGAT2Q10469 447 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 TTMPQ5BVD1 217 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 TIGD3Q6B0B8 471 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 FAM180BQ6P0A1 224 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 HDXQ7Z353 690 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 ZZZ3Q8IYH5 903 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 NAXEQ8NCW5 288 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 TNIP2Q8NFZ5 429 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 OR52R1Q8NGF1 315 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 OR1J4Q8NGS1 313 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 OMA1Q96E52 524 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 APIPQ96GX9 242 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 LCORQ96JN0 433 aaPredicted RBP17.11■□□□□ 0.33
PNKP-213ENST00000599543 PFDN4Q9NQP4 134 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 KLRF1Q9NZS2 232 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 PRODH2Q9UF12 536 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 UTS2RQ9UKP6 389 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 MAP1AP78559 2803 aaPredicted RBP17.11■□□□□ 0.33
PNKP-213ENST00000599543 KIAA1549Q9HCM3 1950 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 MPDZO75970 2070 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 TM9SF1O15321 606 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 CBX7O95931 251 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 IL2RAP01589 272 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 DHRS4L1P0CG22 281 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 NEFHP12036 1026 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 PTPN6P29350 595 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 GCKP35557 465 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 TIMP3P35625 211 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 ASCL1P50553 236 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 WNT3P56703 355 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 RIPPLY3P57055 190 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 WDR4P57081 412 aaKnown RBP17.1■□□□□ 0.33
PNKP-213ENST00000599543 DCAF7P61962 342 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 CSTF3Q12996 717 aaKnown RBP17.1■□□□□ 0.33
PNKP-213ENST00000599543 LTB4RQ15722 352 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 EIPR1Q53HC9 387 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 NHSL2Q5HYW2 709 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 HHATQ5VTY9 493 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 VASNQ6EMK4 673 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 SLC30A6Q6NXT4 461 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 ANGPTL8Q6UXH0 198 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 NUP54Q7Z3B4 507 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 RELL2Q8NC24 303 aaPredicted RBP17.1■□□□□ 0.33
PNKP-213ENST00000599543 CTHRC1Q96CG8 243 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 OSBPL11Q9BXB4 747 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 EBPLQ9BY08 206 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 EHD3Q9NZN3 535 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 ZNF639Q9UID6 485 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 MCM8Q9UJA3 840 aa17.1■□□□□ 0.33
PNKP-213ENST00000599543 HRNRQ86YZ3 2850 aaPredicted RBP17.1■□□□□ 0.33
PNKP-213ENST00000599543 UQCRHLA0A096LP55 91 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 GNG14A0A1W2PPG7 69 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 KDM4EB2RXH2 506 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 AZIN1O14977 448 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 UROSP10746 265 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 CD1EP15812 388 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 BMP7P18075 431 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 CEACAM8P31997 349 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 MRPS35P82673 323 aaKnown RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 DUSP2Q05923 314 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 SNTA1Q13424 505 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 SNTB1Q13884 538 aaKnown RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 IMPG1Q17R60 797 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 TRMT12Q53H54 448 aaKnown RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 WIPI1Q5MNZ9 446 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 SH2D4BQ5SQS7 431 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 AGBL2Q5U5Z8 902 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 TMEM81Q6P7N7 255 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 SIMC1Q8NDZ2 872 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 FAM83FQ8NEG4 500 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 HGDQ93099 445 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 ABTB1Q969K4 478 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 CNRIP1Q96F85 164 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 TRIB1Q96RU8 372 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 UGT2B28Q9BY64 529 aa17.09■□□□□ 0.33
PNKP-213ENST00000599543 DNAJB12Q9NXW2 375 aaKnown RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 ZNF629Q9UEG4 869 aaPredicted RBP17.09■□□□□ 0.33
PNKP-213ENST00000599543 SYT5O00445 386 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 SNPHO15079 494 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 PCDH7O60245 1069 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 ICOSLGO75144 302 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 LINC00032P0C843 101 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 PCSK2P16519 638 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 DNAJA1P31689 397 aaKnown RBP17.08■□□□□ 0.32
PNKP-213ENST00000599543 ART1P52961 327 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 NAA20P61599 178 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
PNKP-213ENST00000599543 SPIN4Q56A73 249 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 DCST1Q5T197 706 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 NSUN5P2Q63ZY6 315 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms