RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 DGAT2L6Q6ZPD8 337 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 PRR14Q9BWN1 585 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 PINK1Q9BXM7 581 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 LIN28AQ9H9Z2 209 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 MAT2BQ9NZL9 334 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 HCN3Q9P1Z3 774 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 MKLN1Q9UL63 735 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC9A8Q9Y2E8 581 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 RNF215Q9Y6U7 377 aa15.92■□□□□ 0.14
SHKBP1-216ENST00000598201 DUXAA6NLW8 204 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 FRS3O43559 492 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 TPST2O60704 377 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 ALPPP05187 535 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 ALDH4A1P30038 563 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 KRT20P35900 424 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 C21orf59P57076 290 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 NUP107P57740 925 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 EXOSC7Q15024 291 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 LPAL2Q16609 132 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 WDR45BQ5MNZ6 344 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 DCST1Q5T197 706 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 LYSMD4Q5XG99 296 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 FRRS1Q6ZNA5 592 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC7A13Q8TCU3 470 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC24A3Q9HC58 644 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 CTPS2Q9NRF8 586 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 MAN2C1Q9NTJ4 1040 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 PTTG2Q9NZH5 202 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 ERVK-18Q9QC07 812 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 KLHL3Q9UH77 587 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 TMCC3Q9ULS5 477 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 A0A1B0GVT2 93 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 CASC3O15234 703 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 AFF3P51826 1226 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 CXCR4P61073 352 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 MAT1AQ00266 395 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 BNIP3Q12983 259 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 EXOSC6Q5RKV6 272 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 PARP8Q8N3A8 854 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 FAM81AQ8TBF8 368 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 ZNF285Q96NJ3 590 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 NODALQ96S42 347 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 DUSP21Q9H596 190 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 CALML5Q9NZT1 146 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC6A14Q9UN76 642 aa15.91■□□□□ 0.14
SHKBP1-216ENST00000598201 A0A087WV62 115 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 RHPN2P1A8MT19 583 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 TGFBR3LH3BV60 316 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 M0R129 80 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 PLOD3O60568 738 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 UGT2B17O75795 530 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 MLLT3P42568 568 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC35A2P78381 396 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 LSM11P83369 360 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 SYT16Q17RD7 645 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 PROX2Q3B8N5 592 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 CCNJQ5T5M9 372 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 GPR107Q5VW38 600 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 TMEM236Q5W0B7 351 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 CLIP4Q8N3C7 705 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 SDR16C5Q8N3Y7 309 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 SLC25A45Q8N413 288 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 OR13F1Q8NGS4 319 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 ISOC1Q96CN7 298 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 NAA50Q9GZZ1 169 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 LHPPQ9H008 270 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 SOHLH2Q9NX45 425 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 LRIT1Q9P2V4 623 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 CENPVL1A0A0U1RR11 272 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 SH3PXD2BA1X283 911 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 TLCD2A6NGC4 264 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 FAAHO00519 579 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 AHCYL1O43865 530 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 OR10H3O60404 316 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 MYF5P13349 255 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 PCMT1P22061 227 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 IDH2P48735 452 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 OR1D5P58170 312 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 LSAMPQ13449 338 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 ERV3-1Q14264 604 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 ARHGAP11BQ3KRB8 267 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 GTF2IRD2BQ6EKJ0 949 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 TYW3Q6IPR3 259 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 PODNL1Q6PEZ8 512 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 GTF2IRD2Q86UP8 949 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 CCDC103Q8IW40 242 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 GALNT15Q8N3T1 639 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 OR52P1PQ8NH57 321 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 CTHRC1Q96CG8 243 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 PEX11GQ96HA9 241 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 MPP4Q96JB8 637 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 ARHGDIGQ99819 225 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 TUBA1CQ9BQE3 449 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 CCDC90BQ9GZT6 254 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 FAM86C1Q9NVL1 165 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 ZNF226Q9NYT6 803 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 REV1Q9UBZ9 1251 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 FTSJ1Q9UET6 329 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 PLCL2Q9UPR0 1127 aa15.9■□□□□ 0.14
SHKBP1-216ENST00000598201 A0A1W2PRQ8 180 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms