RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FOXO1Q12778 655 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 SNTA1Q13424 505 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 DECR1Q16698 335 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 DPY19L1Q2PZI1 675 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 HSP90B2PQ58FF3 399 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 ANXA8L1Q5VT79 327 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 TMEM81Q6P7N7 255 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 SZRD1Q7Z422 152 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 FAM109AQ8N4B1 249 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 CDRT4Q8N9R6 151 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 ACTRT2Q8TDY3 377 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 MOAP1Q96BY2 351 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC35A4Q96G79 324 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 LMF2Q9BU23 707 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 WDR55Q9H6Y2 383 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 METTL7AQ9H8H3 244 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 NEUROD4Q9HD90 331 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 QPCTLQ9NXS2 382 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PCDHGB4Q9UN71 923 aa15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 PRRC2CQ9Y520 2896 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-212ENST00000596163 A0A0G2JMM0 328 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 GOLGA8QA0A0J9YX86 632 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 A0A1W2PPB8 328 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 A0A1W2PRS3 328 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CLEC18AA5D8T8 446 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 GOLGA8OA6NCC3 632 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 FAM166BA8MTA8 275 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 KIR3DP1A8MWS1 328 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 GOLGA8NF8WBI6 632 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 ZIC2O95409 532 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 TGDSO95455 350 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 KIR3DL1P43629 444 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 MASP1P48740 699 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 PER3P56645 1201 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC10A1Q14973 349 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 SPDYE7PQ495Y7 208 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 C4orf17Q53FE4 359 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CMPK2Q5EBM0 449 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 BHLHB9Q6PI77 547 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CLEC18BQ6UXF7 455 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 NPSR1Q6W5P4 371 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 SPPL2CQ8IUH8 684 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CLEC18CQ8NCF0 446 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 OR8J2Q8NGG1 315 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CKAP2Q8WWK9 683 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 HGDQ93099 445 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 TESCQ96BS2 214 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 DTNBP1Q96EV8 351 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 MAELQ96JY0 434 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 ZNF597Q96LX8 424 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 MAGEB18Q96M61 343 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 JSRP1Q96MG2 331 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 RILPQ96NA2 401 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 MS4A4EQ96PG1 132 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 ADOQ96SZ5 270 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 ZBTB18Q99592 522 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 DEFB127Q9H1M4 99 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 ZDHHC11Q9H8X9 412 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 EQTNQ9NQ60 294 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 AIG1Q9NVV5 245 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CBLCQ9ULV8 474 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 SNX8Q9Y5X2 465 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 USH1CQ9Y6N9 552 aa15.86■□□□□ 0.13
SHKBP1-212ENST00000596163 CROCCQ5TZA2 2017 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 UBR5O95071 2799 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 UQCRHLA0A096LP55 91 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 TRGV8A0A0C4DH27 118 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 CDC40O60508 579 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 TSPAN2O60636 221 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC19A2O60779 497 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 UGT2B11O75310 529 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 NME6O75414 186 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 KCNH1O95259 989 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 C6orf47O95873 294 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 KRT16P08779 473 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 IDO1P14902 403 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 ABOP16442 354 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 EFNA1P20827 205 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 GABRA3P34903 492 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 CCT3P49368 545 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 GAB1Q13480 694 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 ARHGAP11AQ6P4F7 1023 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 ACAD11Q709F0 780 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 EID3Q8N140 333 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 ARFGAP2Q8N6H7 521 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 TMEM251Q8N6I4 163 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 OR56A1Q8NGH5 318 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 OR52N2Q8NGI0 321 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 PSMA8Q8TAA3 256 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 GPR151Q8TDV0 419 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 PROK2Q9HC23 129 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 ZCCHC3Q9NUD5 404 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 KLRF1Q9NZS2 232 aa15.85■□□□□ 0.13
SHKBP1-212ENST00000596163 PRSS51A0A1B0GVH4 220 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 PRAMEF25A6NGN4 478 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 RNASET2O00584 256 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 PRRG2O14669 202 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 LRRTM2O43300 516 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 DIAPH2O60879 1101 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 TRIM3O75382 744 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms