RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PRIM2P49643 509 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 PNLIPRP2P54317 469 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 FBXW4P57775 412 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 FAM174BQ3ZCQ3 159 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 KRTCAP3Q53RY4 240 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 SPANXN4Q5MJ08 99 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 NPSR1Q6W5P4 371 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 PRR22Q8IZ63 422 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 GIMAP5Q96F15 307 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 DEPPQ9NTK1 212 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 ZCCHC3Q9NUD5 404 aaKnown RBP23.69■■□□□ 1.38
TRIM28-204ENST00000594806 GIN1Q9NXP7 522 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 CNOT11Q9UKZ1 510 aaKnown RBP23.69■■□□□ 1.38
TRIM28-204ENST00000594806 SNX8Q9Y5X2 465 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 ESPL1Q14674 2120 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 ZGRF1Q86YA3 2104 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 SCN2BO60939 215 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 REM1O75628 298 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 CBX6O95503 412 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 IL6P05231 212 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 KRT16P08779 473 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 ZNF24P17028 368 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 MAP3K8P41279 467 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 PRKAG1P54619 331 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 PSMD4P55036 377 aaKnown RBP23.68■■□□□ 1.38
TRIM28-204ENST00000594806 GPR85P60893 370 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 STX1BP61266 288 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 HBA1P69905 142 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 PMP22Q01453 160 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 EFR3AQ14156 821 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 TMEM198Q66K66 360 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 SZRD1Q7Z422 152 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 MIER2Q8N344 545 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 OR5M3Q8NGP4 307 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 DIO2Q92813 273 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 TMBIM1Q969X1 311 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 TMCO6Q96DC7 493 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 TEX37Q96LM6 180 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 COL21A1Q96P44 957 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 EBF4Q9BQW3 602 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 TMEM45AQ9NWC5 275 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 BTNL2Q9UIR0 455 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 CBLCQ9ULV8 474 aa23.68■■□□□ 1.38
TRIM28-204ENST00000594806 FASNP49327 2511 aaKnown RBP23.68■■□□□ 1.38
TRIM28-204ENST00000594806 ACOT7O00154 380 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 TSPAN2O60636 221 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 NKX2-2O95096 273 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 SNX4O95219 450 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 PGRP06401 933 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 IL12BP29460 328 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 MDH1P40925 334 aaKnown RBP23.67■■□□□ 1.38
TRIM28-204ENST00000594806 TDGF1P3P51864 188 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 NME5P56597 212 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 SNTA1Q13424 505 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 ELOAQ14241 798 aaKnown RBP23.67■■□□□ 1.38
TRIM28-204ENST00000594806 DECR1Q16698 335 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 SPDYE7PQ495Y7 208 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 MFSD12Q6NUT3 480 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 HGDQ93099 445 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 CXorf36Q9H7Y0 433 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 IL1RL2Q9HB29 575 aa23.67■■□□□ 1.38
TRIM28-204ENST00000594806 BOKQ9UMX3 212 aaPredicted RBP23.67■■□□□ 1.38
TRIM28-204ENST00000594806 NME6O75414 186 aaPredicted RBP23.66■■□□□ 1.38
TRIM28-204ENST00000594806 IL12AP29459 219 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 PHC1P78364 1004 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 GAB1Q13480 694 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 HYAL4Q2M3T9 481 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 SLC22A16Q86VW1 577 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 OR52E6Q96RD3 313 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 STACQ99469 402 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 ANGPTL4Q9BY76 406 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 EQTNQ9NQ60 294 aa23.66■■□□□ 1.38
TRIM28-204ENST00000594806 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.66■■□□□ 1.38
TRIM28-204ENST00000594806 PRRC2CQ9Y520 2896 aaKnown RBP23.66■■□□□ 1.38
TRIM28-204ENST00000594806 ANKUB1A6NFN9 424 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 KCNH1O95259 989 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 HMGN2P05204 90 aaKnown RBP23.65■■□□□ 1.38
TRIM28-204ENST00000594806 ALOX5P09917 674 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 TROVE2P10155 538 aaKnown RBP eCLIP23.65■■□□□ 1.388e-18■□□□□ 9.2
TRIM28-204ENST00000594806 MST1P26927 711 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 GABRA3P34903 492 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 PIGAP37287 484 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 CASP3P42574 277 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 ATP4BP51164 291 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 KCNJ2P63252 427 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 GUCY1A3Q02108 690 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 PLGLB1Q02325 96 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 EXOSC6Q5RKV6 272 aaKnown RBP23.65■■□□□ 1.38
TRIM28-204ENST00000594806 SLC30A6Q6NXT4 461 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 MSANTD1Q6ZTZ1 278 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 SIAH3Q8IW03 269 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 CLECL1Q8IZS7 167 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 OR4A15Q8NGL6 344 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 GOT1L1Q8NHS2 421 aaPredicted RBP23.65■■□□□ 1.38
TRIM28-204ENST00000594806 GPR151Q8TDV0 419 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 GPR137Q96N19 417 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 CCDC115Q96NT0 180 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 DOHHQ9BU89 302 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 ACTRT3Q9BYD9 372 aa23.65■■□□□ 1.38
TRIM28-204ENST00000594806 PROK2Q9HC23 129 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms