RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 EPS8L3Q8TE67 593 aaKnown RBP13.41□□□□□ -0.26
PNKP-202ENST00000593706 OMA1Q96E52 524 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 SMR3AQ99954 134 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 GSTO2Q9H4Y5 243 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 ELOVL6Q9H5J4 265 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 SERHLQ9NQF3 203 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 AHSPQ9NZD4 102 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 JKAMPQ9P055 326 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 FN1P02751 2386 aaKnown RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 PRAMEF25A6NGN4 478 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 MANBAO00462 879 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 UBFD1O14562 309 aaKnown RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 ACOX3O15254 700 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 ICOSLGO75144 302 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 GLRA3O75311 464 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 GUCY1B2O75343 617 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 HRGP04196 525 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 INHBBP09529 407 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 NAGAP17050 411 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 LCP2Q13094 533 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 SGO1Q5FBB7 561 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 DESI1Q6ICB0 168 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 SCIMPQ6UWF3 145 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 ZYG11AQ6WRX3 759 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 GPRIN3Q6ZVF9 776 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 NUP54Q7Z3B4 507 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 SLC22A9Q8IVM8 553 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 CDYL2Q8N8U2 506 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 UBLCP1Q8WVY7 318 aaPredicted RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 INTS12Q96CB8 462 aaKnown RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 KLHL29Q96CT2 875 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 C11orf24Q96F05 449 aaPredicted RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 LCORQ96JN0 433 aaPredicted RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 DACH2Q96NX9 599 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 NODALQ96S42 347 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 HBEGFQ99075 208 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 BEX4Q9NWD9 120 aaPredicted RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 DCDC2Q9UHG0 476 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 SNX6Q9UNH7 406 aa13.4□□□□□ -0.26
PNKP-202ENST00000593706 EIF3LQ9Y262 564 aaKnown RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 RAI1Q7Z5J4 1906 aaPredicted RBP13.4□□□□□ -0.26
PNKP-202ENST00000593706 C1orf226A1L170 272 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 CASKO14936 926 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
PNKP-202ENST00000593706 PLIN3O60664 434 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 SUPT7LO94864 414 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 ATP1B1P05026 303 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 NUDT17P0C025 328 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 HSD3B1P14060 373 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 CPN1P15169 458 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 CD53P19397 219 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 HSD3B2P26439 372 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 HOXC12P31275 282 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 CRHR1P34998 444 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 FEN1P39748 380 aaKnown RBP13.39□□□□□ -0.27
PNKP-202ENST00000593706 ALDH9A1P49189 494 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 HTR6P50406 440 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 DIO3P55073 304 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 NKX6-1P78426 367 aaPredicted RBP13.39□□□□□ -0.27
PNKP-202ENST00000593706 SNTA1Q13424 505 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 PRICKLE4Q2TBC4 344 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 SLC48A1Q6P1K1 146 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 TMEM81Q6P7N7 255 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 FAM111BQ6SJ93 734 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 CLEC9AQ6UXN8 241 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 GRAMD2AQ8IUY3 354 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 ADCY4Q8NFM4 1077 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 AENQ8WTP8 325 aaKnown RBP13.39□□□□□ -0.27
PNKP-202ENST00000593706 SELENOMQ8WWX9 145 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 SMPDL3BQ92485 455 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 HGDQ93099 445 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 DTNBP1Q96EV8 351 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 ACPTQ9BZG2 426 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 OR2B2Q9GZK3 357 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 MAT2BQ9NZL9 334 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 NDRG3Q9UGV2 375 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 PACSIN3Q9UKS6 424 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 CES1P1Q9UKY3 287 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 PLLPQ9Y342 182 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 ROS1P08922 2347 aa13.39□□□□□ -0.27
PNKP-202ENST00000593706 ARHGEF9O43307 516 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 UGT2B11O75310 529 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 CBR3O75828 277 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 RCBTB2O95199 551 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 ESRRBO95718 433 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 ENO1P06733 434 aaKnown RBP13.38□□□□□ -0.27
PNKP-202ENST00000593706 CHN1P15882 459 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 CSNK2A2P19784 350 aaPredicted RBP13.38□□□□□ -0.27
PNKP-202ENST00000593706 S1PR1P21453 382 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 PKNOX1P55347 436 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 SLC18A2Q05940 514 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 CSTF3Q12996 717 aaKnown RBP13.38□□□□□ -0.27
PNKP-202ENST00000593706 AAGABQ6PD74 315 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 PLXDC2Q6UX71 529 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 FRMD7Q6ZUT3 714 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 TRIM42Q8IWZ5 723 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms