RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TSPAN10Q9H1Z9 355 aaPredicted RBP14.06□□□□□ -0.16
TRIM47-206ENST00000592942 CXorf36Q9H7Y0 433 aa14.06□□□□□ -0.16
TRIM47-206ENST00000592942 DDX18Q9NVP1 670 aaKnown RBP14.06□□□□□ -0.16
TRIM47-206ENST00000592942 NPIPA1Q9UND3 350 aa14.06□□□□□ -0.16
TRIM47-206ENST00000592942 EXPH5Q8NEV8 1989 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 RP1L1Q8IWN7 2480 aaPredicted RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 ZNHIT1O43257 154 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 HS6ST1O60243 411 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 COQ9O75208 318 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 TRIM3O75382 744 aaPredicted RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 C6orf47O95873 294 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 ZFP36L2P47974 494 aaKnown RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 RPS6KA2Q15349 733 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 PGS1Q32NB8 556 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 LSM12Q3MHD2 195 aaKnown RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 KRTCAP3Q53RY4 240 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 CMPK2Q5EBM0 449 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 FNDC7Q5VTL7 733 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 TMEM81Q6P7N7 255 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 FAM47EQ6ZV65 393 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 FGD2Q7Z6J4 655 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 SLC34A3Q8N130 599 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 NUP43Q8NFH3 380 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 RNF138Q8WVD3 245 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 TESCQ96BS2 214 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 FAM120BQ96EK7 910 aaKnown RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 SLC35A4Q96G79 324 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 C16orf58Q96GQ5 468 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 PRPF18Q99633 342 aaKnown RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 ANGPTL4Q9BY76 406 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 TTTY12Q9BZ98 90 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 ATAD3AQ9NVI7 634 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 SEC14L3Q9UDX4 400 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 MAPRE3Q9UPY8 281 aa14.05□□□□□ -0.16
TRIM47-206ENST00000592942 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.05□□□□□ -0.16
TRIM47-206ENST00000592942 OR6C70A6NIJ9 312 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 LRRC3CA6NJW4 275 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 ADAM10O14672 748 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 TP53I11O14683 189 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 EMC8O43402 210 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 SEMA7AO75326 666 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 UNC5CO95185 931 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 TGDSO95455 350 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 RFPL3SP0C7P2 107 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 ZNF24P17028 368 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 DDX5P17844 614 aaKnown RBP14.04□□□□□ -0.16
TRIM47-206ENST00000592942 GPC1P35052 558 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 IDH3AP50213 366 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 PRKAG1P54619 331 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 NME5P56597 212 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 PPIAP62937 165 aaKnown RBP14.04□□□□□ -0.16
TRIM47-206ENST00000592942 HBA1P69905 142 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 PLCXD2Q0VAA5 305 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 CLECL1Q8IZS7 167 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 TMEM251Q8N6I4 163 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 PRR7Q8TB68 274 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 DYDC1Q8WWB3 177 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 DIO2Q92813 273 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 ZDHHC11Q9H8X9 412 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 IL1RL2Q9HB29 575 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 PLSCR2Q9NRY7 297 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 ZNF835Q9Y2P0 537 aa14.04□□□□□ -0.16
TRIM47-206ENST00000592942 GTF3C1Q12789 2109 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 GXYLT2A0PJZ3 443 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
TRIM47-206ENST00000592942 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 REM1O75628 298 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 NKX2-2O95096 273 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 IGKV1D-16P01601 117 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 ACP2P11117 423 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 GABRA3P34903 492 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 CCT3P49368 545 aaKnown RBP14.03□□□□□ -0.16
TRIM47-206ENST00000592942 TMED10P49755 219 aaKnown RBP14.03□□□□□ -0.16
TRIM47-206ENST00000592942 PNLIPRP2P54317 469 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 HSF1Q00613 529 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 ZNF155Q12901 538 aaPredicted RBP14.03□□□□□ -0.16
TRIM47-206ENST00000592942 CYP27C1Q4G0S4 372 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 SPANXN4Q5MJ08 99 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 NXNQ6DKJ4 435 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 MFSD12Q6NUT3 480 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 GFRALQ6UXV0 394 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 BNC2Q6ZN30 1099 aaPredicted RBP14.03□□□□□ -0.16
TRIM47-206ENST00000592942 GK5Q6ZS86 529 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 SLC16A11Q8NCK7 471 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 FAM110BQ8TC76 370 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 COL21A1Q96P44 957 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 ADOQ96SZ5 270 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 DEFB127Q9H1M4 99 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 C3orf14Q9HBI5 128 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 ZFP64Q9NPA5 681 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 GPATCH2Q9NW75 528 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 OSGIN2Q9Y236 505 aa14.03□□□□□ -0.16
TRIM47-206ENST00000592942 HIVEP3Q5T1R4 2406 aa14.02□□□□□ -0.16
TRIM47-206ENST00000592942 NCKAP5O14513 1909 aa14.02□□□□□ -0.16
TRIM47-206ENST00000592942 PRSS51A0A1B0GVH4 220 aa14.02□□□□□ -0.17
TRIM47-206ENST00000592942 FAM166BA8MTA8 275 aa14.02□□□□□ -0.17
TRIM47-206ENST00000592942 C9JVG2 144 aa14.02□□□□□ -0.17
TRIM47-206ENST00000592942 ICOSLGO75144 302 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms