RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 VPS50Q96JG6 964 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 IP6K3Q96PC2 410 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 SMAD5Q99717 465 aaKnown RBP15.39■□□□□ 0.05
GCDH-213ENST00000590627 CNPPD1Q9BV87 410 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 RAD21L1Q9H4I0 556 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 IKZF5Q9H5V7 419 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 SPAG4Q9NPE6 437 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 TMEM181Q9P2C4 612 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 ERVK-19Q9WJR5 959 aa15.39■□□□□ 0.05
GCDH-213ENST00000590627 HIVEP3Q5T1R4 2406 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 IGHV3-20A0A0C4DH32 117 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 EVPLLA8MZ36 301 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 PRAMEF2O60811 474 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 C1QCP02747 245 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 EMDP50402 254 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 FADDQ13158 208 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 EXOSC7Q15024 291 aaKnown RBP15.38■□□□□ 0.05
GCDH-213ENST00000590627 SPATS1Q496A3 300 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 RABL3Q5HYI8 236 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 SLC6A19Q695T7 634 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 NDUFAF7Q7L592 441 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 ARHGAP24Q8N264 748 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 RBMXL3Q8N7X1 1067 aaKnown RBP15.38■□□□□ 0.05
GCDH-213ENST00000590627 SIMC1Q8NDZ2 872 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 B3GNT7Q8NFL0 401 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 OR52R1Q8NGF1 315 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 DOK4Q8TEW6 326 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 MAGED4Q96JG8 741 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 IMMP1LQ96LU5 166 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 OR8D2Q9GZM6 311 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 OR10A5Q9H207 317 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 KAT8Q9H7Z6 458 aaKnown RBP15.38■□□□□ 0.05
GCDH-213ENST00000590627 ANKRA2Q9H9E1 313 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 CMTM6Q9NX76 183 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 PRODH2Q9UF12 536 aa15.38■□□□□ 0.05
GCDH-213ENST00000590627 PRPF19Q9UMS4 504 aaKnown RBP15.38■□□□□ 0.05
GCDH-213ENST00000590627 SEC24DO94855 1032 aaPredicted RBP15.37■□□□□ 0.05
GCDH-213ENST00000590627 SOX30O94993 753 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 HMGN2P05204 90 aaKnown RBP15.37■□□□□ 0.05
GCDH-213ENST00000590627 BMP2P12643 396 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 SSTR4P31391 388 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 OTX2P32243 289 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 MAP3K8P41279 467 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 SLC7A2P52569 658 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 SLC37A1P57057 533 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 EEFSECP57772 596 aaKnown RBP15.37■□□□□ 0.05
GCDH-213ENST00000590627 MTPNP58546 118 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 SLC26A5P58743 744 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 EEF1A2Q05639 463 aaKnown RBP15.37■□□□□ 0.05
GCDH-213ENST00000590627 TP53BP2Q13625 1128 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 ATP1A4Q13733 1029 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 SELPLGQ14242 412 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 RGNQ15493 299 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 EXT1Q16394 746 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 MFSD12Q6NUT3 480 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 MRGPREQ86SM8 312 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 RNF130Q86XS8 419 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 APCDD1LQ8NCL9 501 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 THUMPD3Q9BV44 507 aaKnown RBP15.37■□□□□ 0.05
GCDH-213ENST00000590627 GIN1Q9NXP7 522 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 CFL2Q9Y281 166 aa15.37■□□□□ 0.05
GCDH-213ENST00000590627 DOPEY1Q5JWR5 2465 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 A6NL46 340 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 TTC36A6NLP5 189 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 OR6C76A6NM76 312 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 NME4O00746 187 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 GSC2O15499 205 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 DNAJA2O60884 412 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 SEMA7AO75326 666 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 DNAJC8O75937 253 aaPredicted RBP15.36■□□□□ 0.05
GCDH-213ENST00000590627 HPP00738 406 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 MAN2A2P49641 1150 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 PRIM2P49643 509 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 GZMMP51124 257 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 PRKAG1P54619 331 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 PRR30Q53SZ7 412 aaPredicted RBP15.36■□□□□ 0.05
GCDH-213ENST00000590627 PLAG1Q6DJT9 500 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 BNC2Q6ZN30 1099 aaPredicted RBP15.36■□□□□ 0.05
GCDH-213ENST00000590627 RNF111Q6ZNA4 994 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 NET1Q7Z628 596 aaPredicted RBP15.36■□□□□ 0.05
GCDH-213ENST00000590627 SERPINA11Q86U17 422 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 CALHM3Q86XJ0 350 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 ZNF321PQ8N8H1 164 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 CDRT4Q8N9R6 151 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 OR8K3Q8NH51 312 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 C16orf52Q8NHV5 167 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 M1APQ8TC57 530 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 NCLNQ969V3 563 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 VMP1Q96GC9 406 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 SLC35G5Q96KT7 338 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 FER1L6-AS2Q96M78 137 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 VSTM2LQ96N03 204 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 CDRT15Q96T59 188 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 MFRPQ9BY79 579 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 ACTRT3Q9BYD9 372 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 TRIM8Q9BZR9 551 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 SERHL2Q9H4I8 314 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 THUMPD1Q9NXG2 353 aaKnown RBP15.36■□□□□ 0.05
GCDH-213ENST00000590627 P4HTMQ9NXG6 502 aa15.36■□□□□ 0.05
GCDH-213ENST00000590627 COPS7AQ9UBW8 275 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms