RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MDS2Q8NDY4 140 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 FBXO30Q8TB52 745 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 GPR151Q8TDV0 419 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 HOXB13Q92826 284 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-214ENST00000590556 TMEM125Q96AQ2 219 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 SPACA9Q96E40 222 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-214ENST00000590556 BBC3Q96PG8 261 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-214ENST00000590556 ACTRT3Q9BYD9 372 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 Q9N2J8 555 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 GPATCH2Q9NW75 528 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 ARMCX1Q9P291 453 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 ARL2BPQ9Y2Y0 163 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 CAPN7Q9Y6W3 813 aa17.66■□□□□ 0.42
DDX39A-214ENST00000590556 ASPDHA6ND91 283 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 ANGPT2O15123 496 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 SLC22A2O15244 555 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 NEURL1O76050 574 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 ALOX5P09917 674 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 ZCCHC18P0CG32 403 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 ACP2P11117 423 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 CD46P15529 392 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 NAGAP17050 411 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 KRT20P35900 424 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 MAP3K8P41279 467 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 TMED10P49755 219 aaKnown RBP17.65■□□□□ 0.42
DDX39A-214ENST00000590556 ZNF169Q14929 603 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-214ENST00000590556 MAPRE2Q15555 327 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 SAXO2Q658L1 398 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 SLC6A19Q695T7 634 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 RTL4Q6ZR62 310 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 SLC16A11Q8NCK7 471 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 TMBIM1Q969X1 311 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 PNPLA2Q96AD5 504 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 OMA1Q96E52 524 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 NEURL3Q96EH8 262 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 SLC35G5Q96KT7 338 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 C5orf34Q96MH7 638 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 LEF1Q9UJU2 399 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-214ENST00000590556 NDUFAF1Q9Y375 327 aa17.65■□□□□ 0.42
DDX39A-214ENST00000590556 A0A096LPI6 279 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 REM1O75628 298 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 PPM1BO75688 479 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 SLC25A12O75746 678 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 NKX2-2O95096 273 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 MATN1P21941 496 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 RPS26P62854 115 aaKnown RBP17.64■□□□□ 0.41
DDX39A-214ENST00000590556 NFATC3Q12968 1075 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 DUSP5Q16690 384 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 PLEKHN1Q494U1 663 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-214ENST00000590556 CYP27C1Q4G0S4 372 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 ZNF766Q5HY98 468 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 PAGE3Q5JUK9 113 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 EXOSC6Q5RKV6 272 aaKnown RBP17.64■□□□□ 0.41
DDX39A-214ENST00000590556 GKAP1Q5VSY0 366 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-214ENST00000590556 SLC25A25Q6KCM7 469 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 CDC73Q6P1J9 531 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 ZNF227Q86WZ6 799 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 FAM13CQ8NE31 585 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 OR4N2Q8NGD1 307 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 OR5M3Q8NGP4 307 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 ADAMTS15Q8TE58 950 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 OTUB1Q96FW1 271 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-214ENST00000590556 SGCZQ96LD1 299 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 PHF12Q96QT6 1004 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 PAIP1Q9H074 479 aaKnown RBP17.64■□□□□ 0.41
DDX39A-214ENST00000590556 TIMMDC1Q9NPL8 285 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 SLC6A13Q9NSD5 602 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 CBLCQ9ULV8 474 aa17.64■□□□□ 0.41
DDX39A-214ENST00000590556 BOD1L1Q8NFC6 3051 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 GXYLT2A0PJZ3 443 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 TP53I11O14683 189 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 SOX30O94993 753 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 KRT75O95678 551 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 SP1P08047 785 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 PTPN6P29350 595 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 FBXW4P57775 412 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 NTRK2Q16620 822 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 DECR1Q16698 335 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 ANGPTL8Q6UXH0 198 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 MDGA2Q7Z553 956 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 COX18Q8N8Q8 333 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 GOLM1Q8NBJ4 401 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 PIK3R3Q92569 461 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 SLC35A4Q96G79 324 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 COL21A1Q96P44 957 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 STACQ99469 402 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 PIGUQ9H490 435 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 KLHL1Q9NR64 748 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 DUSP22Q9NRW4 184 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 MRTO4Q9UKD2 239 aaKnown RBP17.63■□□□□ 0.41
DDX39A-214ENST00000590556 PCDHGB3Q9Y5G1 929 aa17.63■□□□□ 0.41
DDX39A-214ENST00000590556 KCNH1O95259 989 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 IL12BP29460 328 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 PIGAP37287 484 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 MAN2A2P49641 1150 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 CASP9P55211 416 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 GTDC1Q4AE62 458 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 SOWAHCQ53LP3 525 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-214ENST00000590556 COLEC12Q5KU26 742 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 SLC22A10Q63ZE4 541 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms