RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 TP73O15350 636 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 CLDN9O95484 217 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 ATP1B1P05026 303 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 PEPDP12955 493 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 MTHFD2P13995 350 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 NID1P14543 1247 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 CSNK2A2P19784 350 aaPredicted RBP13.76□□□□□ -0.21
ACTN4-211ENST00000589528 DRD5P21918 477 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 CCKARP32238 428 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 PPICP45877 212 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 CCNG1P51959 295 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 ATP5J2P56134 94 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 EEFSECP57772 596 aaKnown RBP13.76□□□□□ -0.21
ACTN4-211ENST00000589528 FGFBP1Q14512 234 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 BCL2A1Q16548 175 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 ANKRD34AQ69YU3 496 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 SLC48A1Q6P1K1 146 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 KLC3Q6P597 504 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 RHEBL1Q8TAI7 183 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 KCTD4Q8WVF5 259 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 CAVIN3Q969G5 261 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 ADOQ96SZ5 270 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 PINK1Q9BXM7 581 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 MRPL1Q9BYD6 325 aaKnown RBP13.76□□□□□ -0.21
ACTN4-211ENST00000589528 CPSF2Q9P2I0 782 aaKnown RBP13.76□□□□□ -0.21
ACTN4-211ENST00000589528 HEY2Q9UBP5 337 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 PROCRQ9UNN8 238 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 ACOT9Q9Y305 439 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 MRPS18CQ9Y3D5 142 aaKnown RBP13.76□□□□□ -0.21
ACTN4-211ENST00000589528 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
ACTN4-211ENST00000589528 A0A087X1B8 175 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 EMC8O43402 210 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 TP53P04637 393 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-211ENST00000589528 GRK2P25098 689 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 KIR2DL2P43627 348 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-211ENST00000589528 ALDH9A1P49189 494 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 DMTNQ08495 405 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 IFT88Q13099 833 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 EFR3AQ14156 821 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 EXOC3L2Q2M3D2 409 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 BEX5Q5H9J7 111 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 RAET1LQ5VY80 246 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 FRG2Q64ET8 278 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 LARP4Q71RC2 724 aaKnown RBP eCLIP13.75□□□□□ -0.214e-8■□□□□ 10.4
ACTN4-211ENST00000589528 CDK15Q96Q40 435 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 FRG2BQ96QU4 278 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
ACTN4-211ENST00000589528 PPP4R1LQ9P1A2 415 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 PCDHA9Q9Y5H5 950 aa13.75□□□□□ -0.21
ACTN4-211ENST00000589528 CCDC189A1A4V9 331 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 CCDC188H7C350 402 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 TO15178 435 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 EIF3HO15372 352 aaKnown RBP eCLIP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 SEC14L5O43304 696 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 BCAS2O75934 225 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 CBX7O95931 251 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 IFNA2P01563 188 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 ALDOAP04075 364 aaKnown RBP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 GSTA2P09210 222 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 PCSK2P16519 638 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 TBXA2RP21731 343 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 NR1H2P55055 460 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 DSCR4P56555 118 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 MRPS35P82673 323 aaKnown RBP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 IRF9Q00978 393 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 VEZF1Q14119 521 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 LTB4RQ15722 352 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 ERCC6LQ2NKX8 1250 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 TRMT12Q53H54 448 aaKnown RBP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 SGO1Q5FBB7 561 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 HMBOX1Q6NT76 420 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 PPP4R4Q6NUP7 873 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 ZNF704Q6ZNC4 412 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-211ENST00000589528 CYS1Q717R9 158 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 CCDC91Q7Z6B0 441 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 ZNF610Q8N9Z0 462 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 FIG4Q92562 907 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 LRRC1Q9BTT6 524 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 FAIM2Q9BWQ8 316 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 DPH5Q9H2P9 285 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 ZNF639Q9UID6 485 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 PCNX3Q9H6A9 2034 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 ABCA1O95477 2261 aa13.74□□□□□ -0.21
ACTN4-211ENST00000589528 STAB1Q9NY15 2570 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-211ENST00000589528 ZIC3O60481 467 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 TMCC2O75069 709 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 TNFRSF21O75509 655 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 SIX3O95343 332 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-211ENST00000589528 ESRRBO95718 433 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 CD8BP10966 210 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 PPP3CBP16298 524 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 HK1P19367 917 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 STX2P32856 288 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 EMDP50402 254 aa13.73□□□□□ -0.21
ACTN4-211ENST00000589528 MRPS22P82650 360 aaKnown RBP13.73□□□□□ -0.21
ACTN4-211ENST00000589528 MGAT2Q10469 447 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms