RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ST3GAL3Q11203 375 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 CDC20Q12834 499 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 PIN1Q13526 163 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 LASP1Q14847 261 aaKnown RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 MLF2Q15773 248 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TSTQ16762 297 aaKnown RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 LEXMQ3ZCV2 418 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 MFSD4BQ5TF39 518 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF468Q5VIY5 522 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 AGAP7PQ5VUJ5 663 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3GQ6DHY5 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3CQ6IPX1 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 SLC48A1Q6P1K1 146 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 PODNL1Q6PEZ8 512 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 C16orf62Q7Z3J2 963 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 FGD2Q7Z6J4 655 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 CACUL1Q86Y37 369 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 SFTPA1Q8IWL2 248 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 RBM12BQ8IXT5 1001 aaKnown RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3Q8IZP1 549 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TCEANCQ8N8B7 351 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TP53I13Q8NBR0 393 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TMEM145Q8NBT3 493 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 GALNT6Q8NCL4 622 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TOR1AIP2Q8NFQ8 470 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 OR52E1Q8NGJ3 308 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TEX47Q8TBZ9 253 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ERLEC1Q96DZ1 483 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 CDC6Q99741 560 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 APOOQ9BUR5 198 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 OR51E2Q9H255 320 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ANKRD19PQ9H560 264 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 XKR8Q9H6D3 395 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ABCB10Q9NRK6 738 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TVP23BQ9NYZ1 205 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ITGB1BP2Q9UKP3 347 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 NCKAP1Q9Y2A7 1128 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 A0A0G2JN53 185 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PRR23AA6NEV1 266 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 TLX2O43763 284 aaPredicted RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RFPL3O75679 317 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SOX14O95416 240 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RAB36O95755 333 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PTTG1O95997 202 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ALPPP05187 535 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SLC35G6P0C7Q6 338 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 NR2F6P10588 404 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 BCL6P41182 706 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RORCP51449 518 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RPS15AP62244 130 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 TRAM2Q15035 370 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SEC23BQ15437 767 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RPE65Q16518 533 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SNAPC1Q16533 368 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF311Q5JNZ3 666 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SLC27A4Q6P1M0 643 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 C1orf94Q6P1W5 598 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 C19orf48Q6RUI8 117 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ADGRD2Q7Z7M1 963 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SLC22A16Q86VW1 577 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 AMIGO1Q86WK6 493 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 EGFL6Q8IUX8 553 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 POC5Q8NA72 575 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 MFSD9Q8NBP5 474 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 OR4K5Q8NGD3 323 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 OR5D16Q8NGK9 328 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 OR8K5Q8NH50 307 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 GNPDA2Q8TDQ7 276 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 LCN9Q8WX39 176 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RFKQ969G6 155 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ELSPBP1Q96BH3 223 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SLC6A18Q96N87 628 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 NEURL2Q9BR09 285 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 TRMT61BQ9BVS5 477 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 CDADC1Q9BWV3 514 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 POLR2J2Q9GZM3 115 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ARMC7Q9H6L4 198 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 KIR3DX1Q9H7L2 352 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 EXOSC4Q9NPD3 245 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ZDHHC4Q9NPG8 344 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PRDM7Q9NQW5 492 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 FBXW2Q9UKT8 454 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 A4GNTQ9UNA3 340 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ASB4Q9Y574 426 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 A0A075B6Q4 140 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 IGKV1-8A0A0C4DH67 115 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 A0A1W2PR48 441 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 BLACEA4D250 179 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 GLOD5A6NK44 160 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 BOLA2-SMG1P6H3BVE0 249 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 AP3D1O14617 1153 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PLD2O14939 933 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PROM1O43490 865 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PLRG1O43660 514 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 RNGTTO60942 597 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 DLGAP3O95886 979 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ASGR2P07307 311 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 HOXC4P09017 264 aaPredicted RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 MYOGP15173 224 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 FCARP24071 287 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms