RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 OR9Q2Q8NGE9 314 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 OR4D11Q8NGI4 311 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF675Q8TD23 568 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ADAMTS18Q8TE60 1221 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PHF10Q8WUB8 498 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 GAB3Q8WWW8 586 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SLC9A6Q92581 669 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 HDAC2Q92769 488 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 MMABQ96EY8 250 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PEX11GQ96HA9 241 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF285Q96NJ3 590 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ALPK1Q96QP1 1244 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 FEVQ99581 238 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ELF4Q99607 663 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 APOL4Q9BPW4 351 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 RSPO3Q9BXY4 272 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 GABARAPL3Q9BY60 117 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SPRTNQ9H040 489 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 QRSL1Q9H0R6 528 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ADNPQ9H2P0 1102 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 EPB41L1Q9H4G0 881 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 CACYBPQ9HB71 228 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PAPOLBQ9NRJ5 636 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ACER3Q9NUN7 267 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TUBA8Q9NY65 449 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 MAT2BQ9NZL9 334 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 NDUFA13Q9P0J0 144 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 KCND3Q9UK17 655 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SLC13A4Q9UKG4 626 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TMCC3Q9ULS5 477 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 C19orf53Q9UNZ5 99 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 MRPS33Q9Y291 106 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SLC9A8Q9Y2E8 581 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 POFUT2Q9Y2G5 429 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PCDHGA8Q9Y5G5 932 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 A0A087WV62 115 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 BLACEA4D250 179 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 FITM1A5D6W6 292 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 TRIM64A6NGJ6 449 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 A8MVJ9 347 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 TMEM150CB9EJG8 249 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 FAAHO00519 579 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 FFAR1O14842 300 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 CASC3O15234 703 aaKnown RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 UGT2B17O75795 530 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 OR6B1O95007 311 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 NSA2O95478 260 aaKnown RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 H1F0P07305 194 aaKnown RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 IFI6P09912 130 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 CT62P0C5K7 136 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 PABPC4LP0CB38 370 aaKnown RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SLC35E2P0CK97 266 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ANXA8P13928 327 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 GLB1P16278 677 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 EEF1B2P24534 225 aaKnown RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 EPHA8P29322 1005 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 CSF2RBP32927 897 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RYKP34925 604 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SOX18P35713 384 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 GPR3P46089 330 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ALDH3B2P48448 385 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 HLCSP50747 726 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RPS6KA3P51812 740 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 MAPK10P53779 464 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SMIM11AP58511 58 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 HSD11B2P80365 405 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 CD47Q08722 323 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 MGAT2Q10469 447 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 STX4Q12846 297 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 NPRL3Q12980 569 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RAPSNQ13702 412 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 FAM53BQ14153 422 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ERV3-1Q14264 604 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 GRM7Q14831 915 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 DUSP5Q16690 384 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SYT16Q17RD7 645 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 PRICKLE4Q2TBC4 344 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 INAVAQ3KP66 663 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ARHGAP11BQ3KRB8 267 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF311Q5JNZ3 666 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 COLEC12Q5KU26 742 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 C6orf141Q5SZD1 244 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 HEPHL1Q6MZM0 1159 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RBM44Q6ZP01 1051 aaKnown RBP8.18□□□□□ -1.1
SMAD4-206ENST00000588860 C11orf74Q86VG3 221 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 VRK2Q86Y07 508 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 PLXDC1Q8IUK5 500 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SLC16A11Q8NCK7 471 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 PIGKQ92643 395 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 CCDC74AQ96AQ1 378 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 DHRS1Q96LJ7 313 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 PSD2Q9BQI7 771 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 YIPF3Q9GZM5 350 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 CHRNA10Q9GZZ6 450 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SLC38A1Q9H2H9 487 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF556Q9HAH1 456 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 NMNAT1Q9HAN9 279 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms