RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 KCNK17Q96T54 332 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 NTMT1Q9BV86 223 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 ACTR6Q9GZN1 396 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 NUDT4Q9NZJ9 180 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 TXNDC16Q9P2K2 825 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 PLLPQ9Y342 182 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 ZNF175Q9Y473 711 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 TEX264Q9Y6I9 313 aa19.58■□□□□ 0.72
CAPNS1-205ENST00000588780 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.58■□□□□ 0.725e-7■■■□□ 17.3
CAPNS1-205ENST00000588780 GOLGA6L10A6NI86 522 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 OR6C70A6NIJ9 312 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 GOLGA6L6A8MZA4 724 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 H3BML4 177 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 ERAL1O75616 437 aaKnown RBP19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 PIAS1O75925 651 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 SOD3P08294 240 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 STMN1P16949 149 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 HK1P19367 917 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 S1PR1P21453 382 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 IL12BP29460 328 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 CTBP2P56545 445 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 DSCR4P56555 118 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 RPS3AP61247 264 aaKnown RBP19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 CUL3Q13618 768 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 CPSF6Q16630 551 aaKnown RBP eCLIP19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 GBP7Q8N8V2 638 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 OR52R1Q8NGF1 315 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 RAB3IL1Q8TBN0 382 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 STAG3L4Q8TBR4 150 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 TMEM204Q9BSN7 226 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 MOCS1Q9NZB8 636 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 PPP4R1LQ9P1A2 415 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 PRODH2Q9UF12 536 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 RNF115Q9Y4L5 304 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 CUBNO60494 3623 aa19.57■□□□□ 0.72
CAPNS1-205ENST00000588780 A0A1W2PP18 115 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 FCGR2AP12318 317 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 DRD5P21918 477 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 FEN1P39748 380 aaKnown RBP19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 ARL1P40616 181 aaPredicted RBP19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 PPICP45877 212 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 SUCLG1P53597 346 aaKnown RBP19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 ARL4CP56559 192 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 B3GALT5-AS1P59052 145 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 FRG1Q14331 258 aaKnown RBP19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 C6orf52Q5T4I8 152 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 STAC2Q6ZMT1 411 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 SMAP2Q8WU79 429 aaPredicted RBP19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 GFM2Q969S9 779 aaKnown RBP19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 RHNO1Q9BSD3 238 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 DSN1Q9H410 356 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 SMYD2Q9NRG4 433 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 CLEC4AQ9UMR7 237 aa19.56■□□□□ 0.72
CAPNS1-205ENST00000588780 OVOL3O00110 214 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 UBXN8O00124 270 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 GPRIN2O60269 458 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 IGHV4-39P01824 125 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 KLK1P06870 262 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 ILF2Q12905 390 aaKnown RBP19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 EFR3AQ14156 821 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 PRICKLE4Q2TBC4 344 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 LIPJQ5W064 366 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 FBXO36Q8NEA4 188 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 OR5M1Q8NGP8 315 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 ALG2Q9H553 416 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 MAT2BQ9NZL9 334 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 ZNF337Q9Y3M9 751 aa19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 MAGED1Q9Y5V3 778 aaPredicted RBP19.55■□□□□ 0.72
CAPNS1-205ENST00000588780 SCO2O43819 266 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 WISP3O95389 354 aaPredicted RBP19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 CD3EP07766 207 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 CLDN15P56746 228 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 MAP4K2Q12851 820 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 PDIA2Q13087 525 aaKnown RBP19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 MORF4L2Q15014 288 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 CCNYL2Q5T2Q4 361 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 LARP4Q71RC2 724 aaKnown RBP eCLIP19.54■□□□□ 0.728e-7■■□□□ 12.1
CAPNS1-205ENST00000588780 OR6K3Q8NGY3 331 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 BARX1Q9HBU1 254 aaPredicted RBP19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 TSC22D4Q9Y3Q8 395 aa19.54■□□□□ 0.72
CAPNS1-205ENST00000588780 SSX4O60224 188 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 NDUFS7O75251 213 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 AQP8O94778 261 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 CSNK2A2P19784 350 aaPredicted RBP19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 PIK3CGP48736 1102 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 CLDN20P56880 219 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 SRSF2Q01130 221 aaKnown RBP19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 CTU2Q2VPK5 515 aaKnown RBP19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 TRMT12Q53H54 448 aaKnown RBP19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 RAPH1Q70E73 1250 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 STK32CQ86UX6 486 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 UBTD2Q8WUN7 234 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 SERPINI1Q99574 410 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 SHARPINQ9H0F6 387 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 LRTM1Q9HBL6 345 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 PFDN4Q9NQP4 134 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 PLSCR4Q9NRQ2 329 aa19.53■□□□□ 0.72
CAPNS1-205ENST00000588780 C17orf51A8MQB3 221 aa19.52■□□□□ 0.72
CAPNS1-205ENST00000588780 H0YIV9 168 aa19.52■□□□□ 0.72
CAPNS1-205ENST00000588780 TO15178 435 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms