RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 LILRB4Q8NHJ6 448 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 AGR3Q8TD06 166 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 TWIST2Q8WVJ9 160 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 EGLN2Q96KS0 407 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 AMDHD1Q96NU7 426 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 ADOQ96SZ5 270 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 TUBB1Q9H4B7 451 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 GLIPR2Q9H4G4 154 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 KCNJ16Q9NPI9 418 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 TMED5Q9Y3A6 229 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 PCDHGB3Q9Y5G1 929 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 FAM215AQ9Y5M1 114 aa17.88■□□□□ 0.45
TPM4-208ENST00000588410 C2orf72A6NCS6 295 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 SNPHO15079 494 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 AKAP10O43572 662 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 GLI4P10075 376 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 PRF1P14222 555 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 ZNHIT3Q15649 155 aaPredicted RBP17.87■□□□□ 0.45
TPM4-208ENST00000588410 NPSR1Q6W5P4 371 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 GDF7Q7Z4P5 450 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 PPP1R14CQ8TAE6 165 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 PPCDCQ96CD2 204 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 DTNBP1Q96EV8 351 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 SLC35A4Q96G79 324 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 TSSK3Q96PN8 268 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 UBQLN3Q9H347 655 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 GALNT9Q9HCQ5 603 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 C19orf53Q9UNZ5 99 aaPredicted RBP17.87■□□□□ 0.45
TPM4-208ENST00000588410 MAPRE3Q9UPY8 281 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 EXO1Q9UQ84 846 aaKnown RBP17.87■□□□□ 0.45
TPM4-208ENST00000588410 NBPF19A0A087WUL8 3843 aa17.87■□□□□ 0.45
TPM4-208ENST00000588410 NOTCH2Q04721 2471 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 ESPNB1AK53 854 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 TMEM233B4DJY2 109 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 PLOD2O00469 737 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 PIP5K1BO14986 540 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 PDPK1O15530 556 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 CTIFO43310 598 aaKnown RBP17.86■□□□□ 0.45
TPM4-208ENST00000588410 BPGMP07738 259 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 CREB1P16220 341 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 PTPN6P29350 595 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 GPC1P35052 558 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 KIR3DL1P43629 444 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 RFTN2Q52LD8 501 aaPredicted RBP17.86■□□□□ 0.45
TPM4-208ENST00000588410 RTL6Q6ICC9 239 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 ULK2Q8IYT8 1036 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 ZFP28Q8NHY6 868 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 ELP4Q96EB1 424 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 FCRL1Q96LA6 429 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 REEP4Q9H6H4 257 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 SLC6A5Q9Y345 797 aa17.86■□□□□ 0.45
TPM4-208ENST00000588410 AHRRA9YTQ3 701 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 UPK1AO00322 258 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 LSM1O15116 133 aaKnown RBP17.85■□□□□ 0.45
TPM4-208ENST00000588410 TYROBPO43914 113 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 TSPAN2O60636 221 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 CBR3O75828 277 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 TUBBP07437 444 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 DDX5P17844 614 aaKnown RBP17.85■□□□□ 0.45
TPM4-208ENST00000588410 SDC1P18827 310 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 MAPK1P28482 360 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 PTGDSP41222 190 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 ASMTP46597 345 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 ZFP36L2P47974 494 aaKnown RBP17.85■□□□□ 0.45
TPM4-208ENST00000588410 PNLIPRP2P54317 469 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 ZNF844Q08AG5 666 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 HSPB3Q12988 150 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 SF3B4Q15427 424 aaKnown RBP eCLIP17.85■□□□□ 0.454e-8■■□□□ 12.4
TPM4-208ENST00000588410 EIPR1Q53HC9 387 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 WIPI1Q5MNZ9 446 aaPredicted RBP17.85■□□□□ 0.45
TPM4-208ENST00000588410 ANKRD26P1Q6NSI1 321 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 NUDCD3Q8IVD9 361 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 PM20D2Q8IYS1 436 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 OR2L13Q8N349 312 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 CLHC1Q8NHS4 586 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 EFHD2Q96C19 240 aaPredicted RBP17.85■□□□□ 0.45
TPM4-208ENST00000588410 NTNG2Q96CW9 530 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 PPP3R2Q96LZ3 170 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 TIMP4Q99727 224 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 SPOCK3Q9BQ16 436 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 UCK2Q9BZX2 261 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 CENPHQ9H3R5 247 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 Q9N2J8 555 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 SERHLQ9NQF3 203 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 SH3BP4Q9P0V3 963 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 BAIAP2L1Q9UHR4 511 aa17.85■□□□□ 0.45
TPM4-208ENST00000588410 MRTO4Q9UKD2 239 aaKnown RBP17.85■□□□□ 0.45
TPM4-208ENST00000588410 NKX2-6A6NCS4 301 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 TMEM114B3SHH9 223 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 PSG6Q00889 435 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 CRYZQ08257 329 aaKnown RBP17.84■□□□□ 0.45
TPM4-208ENST00000588410 DECR1Q16698 335 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 UGT3A2Q3SY77 523 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 CYP27C1Q4G0S4 372 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 ATP6AP1LQ52LC2 224 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 MEX3BQ6ZN04 569 aaKnown RBP17.84■□□□□ 0.45
TPM4-208ENST00000588410 ZNF551Q7Z340 670 aaPredicted RBP17.84■□□□□ 0.45
TPM4-208ENST00000588410 YRDCQ86U90 279 aaKnown RBP17.84■□□□□ 0.45
TPM4-208ENST00000588410 PLCZ1Q86YW0 608 aa17.84■□□□□ 0.45
TPM4-208ENST00000588410 FAM83FQ8NEG4 500 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms