RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 IGF2-ASQ6U949 168 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 ENPP6Q6UWR7 440 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 CCDC80Q76M96 950 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 C16orf62Q7Z3J2 963 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 PPP1R32Q7Z5V6 425 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 SLC30A8Q8IWU4 369 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 C9orf40Q8IXQ3 194 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 ADGRG5Q8IZF4 528 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 ZSCAN1Q8NBB4 408 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 B3GNT7Q8NFL0 401 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 OR4N2Q8NGD1 307 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 OR52E4Q8NGH9 312 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 OR1N1Q8NGS0 311 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 GPR151Q8TDV0 419 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 CANT1Q8WVQ1 401 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 NKD1Q969G9 470 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 SLCO4A1Q96BD0 722 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 TAMM41Q96BW9 452 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 RSRC1Q96IZ7 334 aaKnown RBP10.49□□□□□ -0.73
VMP1-207ENST00000588131 S100A14Q9HCY8 104 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 DUSP22Q9NRW4 184 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 DCAF13Q9NV06 445 aaKnown RBP10.49□□□□□ -0.73
VMP1-207ENST00000588131 FBXO34Q9NWN3 711 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 MRPS18BQ9Y676 258 aaKnown RBP10.49□□□□□ -0.73
VMP1-207ENST00000588131 SEC16AO15027 2179 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 FAM186AA6NE01 2351 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 IGHV1-45A0A0A0MS14 117 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 TMEM247A6NEH6 219 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 TMEM229AB2RXF0 380 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 C21orf140B9A014 251 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 H0Y3Z8 333 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 PRKD3O94806 890 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 H6PDO95479 791 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 ATP6V1G2O95670 118 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 AGR2O95994 175 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 IGHEP01854 428 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CT45A8P0DMV1 189 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CT45A9P0DMV2 189 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 COX6A1P12074 109 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 MMP11P24347 488 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CD82P27701 267 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 OTX2P32243 289 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CLCN2P51788 898 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 SLC26A5P58743 744 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 RPS15P62841 145 aaKnown RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 POU6F2P78424 691 aaPredicted RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 CHRNEQ04844 493 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 FOXC1Q12948 553 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 RIPK1Q13546 671 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 EBPQ15125 230 aaKnown RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 TGIF1Q15583 401 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 ZNHIT3Q15649 155 aaPredicted RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 ARHGAP11BQ3KRB8 267 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CT45A2Q5DJT8 189 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 MTX3Q5HYI7 312 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 DCST2Q5T1A1 773 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 ATAD3BQ5T9A4 648 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 INTS11Q5TA45 600 aaKnown RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 FIGNL1Q6PIW4 674 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 KIRREL2Q6UWL6 708 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CBLL1Q75N03 491 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 HMGN2P46Q86SG4 172 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 DTX1Q86Y01 620 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 METTL25Q8N6Q8 603 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 COX18Q8N8Q8 333 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 APCDD1LQ8NCL9 501 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 CHDHQ8NE62 594 aaPredicted RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 OR10Q1Q8NGQ4 319 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 BBS10Q8TAM1 723 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 STMN2Q93045 179 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 DUS3LQ96G46 650 aaKnown RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 BTBD9Q96Q07 612 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 TRNT1Q96Q11 434 aaKnown RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 GAL3ST4Q96RP7 486 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 LPAR4Q99677 370 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 TREX2Q9BQ50 279 aaPredicted RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 RSPO3Q9BXY4 272 aaPredicted RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 SEMA4CQ9C0C4 833 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 NRSN2Q9GZP1 204 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 ZNF700Q9H0M5 742 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 SLC38A1Q9H2H9 487 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 BCL2L10Q9HD36 194 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 OLAHQ9NV23 265 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 EXD2Q9NVH0 621 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 COPS7AQ9UBW8 275 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 KLK13Q9UKR3 277 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 PPIEQ9UNP9 301 aaKnown RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 LIPT1Q9Y234 373 aa10.48□□□□□ -0.73
VMP1-207ENST00000588131 GPR55Q9Y2T6 319 aaPredicted RBP10.48□□□□□ -0.73
VMP1-207ENST00000588131 RIF1Q5UIP0 2472 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 DHRS12A0PJE2 317 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 OR6C76A6NM76 312 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 M0QX08 132 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 MASP2O00187 686 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 FCMRO60667 390 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 FKBP6O75344 327 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 ZNF682O95780 498 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 IGKV1D-16P01601 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms