RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.85	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	GALNT8	Q9NY28	637 aa		14.85	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	DLGAP4	Q9Y2H0	992 aa		14.85	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	MRPS18C	Q9Y3D5	142 aa	Known RBP	14.85	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	FREM3	P0C091	2139 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	MED12	Q93074	2177 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460		A8MXE2	369 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460		B4DXG7	233 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	TRIM49D1	C9J1S8	452 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	PLOD2	O00469	737 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	TSPAN2	O60636	221 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	GOSR1	O95249	250 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	CD53	P19397	219 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	SRD5A2	P31213	254 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	CORO7	P57737	925 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	RAE1	P78406	368 aa	Known RBP	14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	CLC	Q05315	142 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	POU4F3	Q15319	338 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	UNC50	Q53HI1	259 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	OR5M10	Q6IEU7	315 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	ZNF675	Q8TD23	568 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	BTBD9	Q96Q07	612 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	CLCF1	Q9UBD9	225 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	TRPS1	Q9UHF7	1281 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	MCM8	Q9UJA3	840 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	KIAA1549	Q9HCM3	1950 aa		14.84	□□□□□ -0.03
PRKAR1A-206	ENST00000585460	POC1B-GALNT4	F8VUJ3	575 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	BCAS2	O75934	225 aa	Predicted RBP	14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ESRRB	O95718	433 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	TGM6	O95932	706 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	DRD2	P14416	443 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	GAS1	P54826	345 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	CLDN18	P56856	261 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	GAB1	Q13480	694 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	TEX35	Q5T0J7	233 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	NPSR1	Q6W5P4	371 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	IFNE	Q86WN2	208 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	GCNT2	Q8N0V5	402 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	CDYL2	Q8N8U2	506 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	OR9A2	Q8NGT5	310 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	UHMK1	Q8TAS1	419 aa	Known RBP	14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	RNF138	Q8WVD3	245 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ERP27	Q96DN0	273 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	VSTM2L	Q96N03	204 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	PIGM	Q9H3S5	423 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	DMGDH	Q9UI17	866 aa	Known RBP	14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ZNF180	Q9UJW8	692 aa		14.83	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ARHGAP21	Q5T5U3	1957 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	SH3D21	A4FU49	640 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ABCB7	O75027	752 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	TNFSF13	O75888	250 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	KRT6A	P02538	564 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	KRT6B	P04259	564 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	IL3	P08700	152 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	HSD3B1	P14060	373 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ZNF708	P17019	499 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	CHM	P24386	653 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	HSD3B2	P26439	372 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	CPA2	P48052	419 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	KRT6C	P48668	564 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	B3GALT5-AS1	P59052	145 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	EEF1A1	P68104	462 aa	Known RBP	14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	BCL2A1	Q16548	175 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	EEF1A1P5	Q5VTE0	462 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	AAGAB	Q6PD74	315 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	LARP4	Q71RC2	724 aa	Known RBP eCLIP	14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	TAOK1	Q7L7X3	1001 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	KRTAP1-3	Q8IUG1	177 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	OR4N2	Q8NGD1	307 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	IFT81	Q8WYA0	676 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	EXOSC8	Q96B26	276 aa	Known RBP	14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	SFXN2	Q96NB2	322 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	SMR3A	Q99954	134 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	TSPYL1	Q9H0U9	437 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	NEUROD4	Q9HD90	331 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	PFDN4	Q9NQP4	134 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	WIF1	Q9Y5W5	379 aa		14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	14.82	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	C17orf51	A8MQB3	221 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	CASK	O14936	926 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	DLX3	O60479	287 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	PLOD3	O60568	738 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ULK1	O75385	1050 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	SUPT7L	O94864	414 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	SNRPA	P09012	282 aa	Known RBP	14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	GRK2	P25098	689 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	DPP4	P27487	766 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	PNLIPRP2	P54317	469 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	CKAP4	Q07065	602 aa	Known RBP	14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	FAM27E3	Q08E93	113 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	EFR3A	Q14156	821 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	RASA2	Q15283	850 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	PRSS53	Q2L4Q9	553 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	ZNF678	Q5SXM1	525 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	SLC44A2	Q8IWA5	706 aa	Predicted RBP	14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	METTL6	Q8TCB7	284 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	C16orf78	Q8WTQ4	265 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	STARD4	Q96DR4	205 aa		14.81	□□□□□ -0.04
PRKAR1A-206	ENST00000585460	APIP	Q96GX9	242 aa		14.81	□□□□□ -0.04

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms