RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 NUBPLQ8TB37 319 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 FBXO30Q8TB52 745 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 M1APQ8TC57 530 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 ELP5Q8TE02 316 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 SLC38A5Q8WUX1 472 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 SLC9A6Q92581 669 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 JADE3Q92613 823 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 MAL2Q969L2 176 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 IP6K3Q96PC2 410 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 GORASP2Q9H8Y8 452 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 BCL2L10Q9HD36 194 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 EXD2Q9NVH0 621 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 EGFL7Q9UHF1 273 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 PCDHGB3Q9Y5G1 929 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 MRPS18BQ9Y676 258 aaKnown RBP14.97□□□□□ -0.01
SS18-226ENST00000585241 KCNE3Q9Y6H6 103 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 SPTBN4Q9H254 2564 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 DCHS1Q96JQ0 3298 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 A8MVJ9 347 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 CXCR6O00574 342 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 TO15178 435 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 LIFP15018 202 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 SPINK2P20155 84 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 DRD5P21918 477 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 OTX2P32243 289 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 CLCN2P51788 898 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 ACTR3P61158 418 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 PSPHP78330 225 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 CLN3Q13286 438 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 GNA13Q14344 377 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 ARHGAP11BQ3KRB8 267 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 INTS11Q5TA45 600 aaKnown RBP14.96□□□□□ -0.01
SS18-226ENST00000585241 C1orf146Q5VVC0 180 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 GLYATQ6IB77 296 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 SLC29A4Q7RTT9 530 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 WDR53Q7Z5U6 358 aaPredicted RBP14.96□□□□□ -0.01
SS18-226ENST00000585241 NFKBIDQ8NI38 313 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 WDR60Q8WVS4 1066 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 XAGE5Q8WWM1 108 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 PCSK5Q92824 1860 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 CDS1Q92903 461 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 OTUB1Q96FW1 271 aaPredicted RBP14.96□□□□□ -0.01
SS18-226ENST00000585241 TMEM19Q96HH6 336 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 TRNT1Q96Q11 434 aaKnown RBP14.96□□□□□ -0.01
SS18-226ENST00000585241 BTBD2Q9BX70 525 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 WWTR1Q9GZV5 400 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 DENND2DQ9H6A0 471 aaPredicted RBP14.96□□□□□ -0.01
SS18-226ENST00000585241 MMP25Q9NPA2 562 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 DKK4Q9UBT3 224 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 ANGPT4Q9Y264 503 aa14.96□□□□□ -0.01
SS18-226ENST00000585241 DSPPQ9NZW4 1301 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 NSG1A0A0A6YYJ2 146 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 FRG2CA6NGY1 282 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 GCM2O75603 506 aaPredicted RBP14.95□□□□□ -0.02
SS18-226ENST00000585241 BCHEP06276 602 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 ATP6V1B2P21281 511 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 GABRA3P34903 492 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 CRISP3P54108 245 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 POLE2P56282 527 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 RNF4P78317 190 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 DMTNQ08495 405 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 FLOT2Q14254 428 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 CRTC2Q53ET0 693 aaPredicted RBP14.95□□□□□ -0.02
SS18-226ENST00000585241 MTX3Q5HYI7 312 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 ATAD3BQ5T9A4 648 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 REEP3Q6NUK4 255 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 HSDL2Q6YN16 418 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 LRRC74BQ6ZQY2 392 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 DHFR2Q86XF0 187 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 COX18Q8N8Q8 333 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 ANKFN1Q8N957 763 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 SNIP1Q8TAD8 396 aaKnown RBP14.95□□□□□ -0.02
SS18-226ENST00000585241 FAM110BQ8TC76 370 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 TP53INP1Q96A56 240 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 LCORQ96JN0 433 aaPredicted RBP14.95□□□□□ -0.02
SS18-226ENST00000585241 ZNF350Q9GZX5 532 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 Q9N2J8 555 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 POLE3Q9NRF9 147 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 RYDENQ9NUL5 291 aaKnown RBP14.95□□□□□ -0.02
SS18-226ENST00000585241 P4HTMQ9NXG6 502 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 CALML5Q9NZT1 146 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 FBXL4Q9UKA2 621 aa14.95□□□□□ -0.02
SS18-226ENST00000585241 RRP15Q9Y3B9 282 aaKnown RBP14.95□□□□□ -0.02
SS18-226ENST00000585241 TRBV11-1A0A0K0K1C0 115 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 C2orf92A0A1B0GVN3 265 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 TMEM247A6NEH6 219 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 AQP12BA6NM10 295 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 GSTA4O15217 222 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 ACOX3O15254 700 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 PRKNO60260 465 aaPredicted RBP14.94□□□□□ -0.02
SS18-226ENST00000585241 PGM3O95394 542 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 CHRM4P08173 479 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 ADRB1P08588 477 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 NR2F1P10589 423 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 NCK1P16333 377 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 PIGAP37287 484 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 CRYBA2P53672 197 aa14.94□□□□□ -0.02
SS18-226ENST00000585241 POU6F2P78424 691 aaPredicted RBP14.94□□□□□ -0.02
SS18-226ENST00000585241 ELOAQ14241 798 aaKnown RBP14.94□□□□□ -0.02
SS18-226ENST00000585241 SYPL1Q16563 259 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms