RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 OR2A1Q8NGT9 310 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RSPRY1Q96DX4 576 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 CNRIP1Q96F85 164 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 DEPDC7Q96QD5 511 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 GDF15Q99988 308 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 RNF121Q9H920 327 aa13.34□□□□□ -0.27
CDK5RAP3-237ENST00000585163 A0A0B4J293 547 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRDV1A0A1B0GX56 115 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FAM170BA6NMN3 283 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PGRMC2O15173 223 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TIMP1P01033 207 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ALPPL2P10696 532 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EPCAMP16422 314 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SSTR4P31391 388 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KIR2DL3P43628 341 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SFTPA1Q8IWL2 248 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NR4A3Q92570 626 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RNF31Q96EP0 1072 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C16orf58Q96GQ5 468 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RNF170Q96K19 258 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FRMD6Q96NE9 622 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HDAC8Q9BY41 377 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRRG3Q9BZD7 231 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CNIH4Q9P003 139 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DEC1Q9P2X7 70 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ASB4Q9Y574 426 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KCNE3Q9Y6H6 103 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NUMA1Q14980 2115 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 A0A1W2PR48 441 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NDUFB5O43674 189 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SCO2O43819 266 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HLA-DQB1P01920 261 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.288e-6■□□□□ 10.1
CDK5RAP3-237ENST00000585163 CD79BP40259 229 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CAV3P56539 151 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ARPC4P59998 168 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PPP3R1P63098 170 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DUSP2Q05923 314 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MAP4K2Q12851 820 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRAM2Q15035 370 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZIC1Q15915 447 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF311Q5JNZ3 666 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF697Q5TEC3 545 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TYW3Q6IPR3 259 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SHFQ7M4L6 423 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CCDC116Q8IYX3 515 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GJD3Q8N144 294 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RAB42Q8N4Z0 105 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR56A1Q8NGH5 318 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DIO2Q92813 273 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RAB7BQ96AH8 199 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MOAP1Q96BY2 351 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ARHGDIGQ99819 225 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TTYH2Q9BSA4 534 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NUFIP1Q9UHK0 495 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ATG4BQ9Y4P1 393 aa13.33□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C4orf51C9J302 202 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 LALBAP00709 142 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CSF2P04141 144 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GAAP10253 952 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HIST1H1TP22492 207 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MLLT3P42568 568 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC1A3P43003 542 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OMPP47874 163 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MLF2Q15773 248 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GAB4Q2WGN9 574 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MRM1Q6IN84 353 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 LHFPL3Q86UP9 236 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ARIH2OSQ8N7S6 290 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZFP41Q8N8Y5 198 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SIMC1Q8NDZ2 872 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR8K5Q8NH50 307 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MS4A6EQ96DS6 147 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FAM46AQ96IP4 442 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC38A1Q9H2H9 487 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PPP1R3EQ9H7J1 279 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRDM7Q9NQW5 492 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ACSL5Q9ULC5 683 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 LIPT1Q9Y234 373 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CASKO14936 926 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ERI3O43414 337 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HCN1O60741 890 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 BCL6P41182 706 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 VIPR2P41587 438 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RAB28P51157 221 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CDH11P55287 796 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RACK1P63244 317 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HOXC5Q00444 222 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms