RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 NAA20P61599 178 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 DCAF7P61962 342 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 IFFO1Q0D2I5 559 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 ZNF155Q12901 538 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-208ENST00000584773 ERCC6LQ2NKX8 1250 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 SLC44A2Q8IWA5 706 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-208ENST00000584773 ACBD4Q8NC06 268 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 OR1J4Q8NGS1 313 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 CLHC1Q8NHS4 586 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 AGR3Q8TD06 166 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 EFHD2Q96C19 240 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-208ENST00000584773 ADOQ96SZ5 270 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 TIMP4Q99727 224 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 IQCGQ9H095 443 aaKnown RBP16.45■□□□□ 0.22
SRSF1-208ENST00000584773 RUBCNLQ9H714 662 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 LRTM1Q9HBL6 345 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 GIMAP2Q9UG22 337 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 LGALS13Q9UHV8 139 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 MID2Q9UJV3 735 aa16.45■□□□□ 0.22
SRSF1-208ENST00000584773 PDZD2O15018 2839 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 B4DXG7 233 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 H3BQF6 201 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 PLOD3O60568 738 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 TSPAN2O60636 221 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 ARRB2P32121 409 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 MPIP34949 423 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 GSTM5P46439 218 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 ZNF385BQ569K4 471 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 SH2D4BQ5SQS7 431 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 KANK2Q63ZY3 851 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 SAMD14Q8IZD0 417 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-208ENST00000584773 RIBC1Q8N443 379 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-208ENST00000584773 WDSUB1Q8N9V3 476 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 FAM83FQ8NEG4 500 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-208ENST00000584773 TCP10LQ8TDR4 215 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 CIDECQ96AQ7 238 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-208ENST00000584773 COL21A1Q96P44 957 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 SPOCK3Q9BQ16 436 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 DNAJC15Q9Y5T4 150 aa16.44■□□□□ 0.22
SRSF1-208ENST00000584773 AKAP9Q99996 3911 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 POLQO75417 2590 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 SLC28A1O00337 649 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 AKAP10O43572 662 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 SLU7O95391 586 aaKnown RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 IGFBP2P18065 325 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 BMP7P18075 431 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 SDC1P18827 310 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 TCEA1P23193 301 aaKnown RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 PRPH2P23942 346 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 MSX1P28360 303 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 ZFP36L2P47974 494 aaKnown RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 RPL38P63173 70 aaKnown RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 PSG6Q00889 435 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 ACSF3Q4G176 576 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 ARL13AQ5H913 290 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 OR5M10Q6IEU7 315 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 SLC30A6Q6NXT4 461 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 TMEM81Q6P7N7 255 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 LARP4Q71RC2 724 aaKnown RBP eCLIP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 ZNF551Q7Z340 670 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 NAXEQ8NCW5 288 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 FAM76AQ8TAV0 307 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 ERP27Q96DN0 273 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 SLC35A4Q96G79 324 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 LURAP1Q96LR2 239 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 AMDHD1Q96NU7 426 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 TSSK3Q96PN8 268 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 TREX2Q9BQ50 279 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-208ENST00000584773 UGT2B28Q9BY64 529 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 KCNJ16Q9NPI9 418 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 C1orf109Q9NX04 203 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 FLRT3Q9NZU0 649 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 BAIAP2L1Q9UHR4 511 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 FBXL2Q9UKC9 423 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 CAMK2AQ9UQM7 478 aa16.43■□□□□ 0.22
SRSF1-208ENST00000584773 OR6C70A6NIJ9 312 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 UPK1AO00322 258 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 RGS14O43566 566 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 GABRA1P14867 456 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 NTSP30990 170 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 HSPB3Q12988 150 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 SNTB1Q13884 538 aaKnown RBP16.42■□□□□ 0.22
SRSF1-208ENST00000584773 GALNTL6Q49A17 601 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 RFTN2Q52LD8 501 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-208ENST00000584773 VASNQ6EMK4 673 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 TNIP2Q8NFZ5 429 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 TWIST2Q8WVJ9 160 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 CAVIN3Q969G5 261 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 FCRL1Q96LA6 429 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 TAS2R9Q9NYW1 312 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 TAS2R7Q9NYW3 318 aa16.42■□□□□ 0.22
SRSF1-208ENST00000584773 PCNX3Q9H6A9 2034 aa16.41■□□□□ 0.22
SRSF1-208ENST00000584773 NPIPB8E9PQR5 432 aa16.41■□□□□ 0.22
SRSF1-208ENST00000584773 PIP5K1BO14986 540 aa16.41■□□□□ 0.22
SRSF1-208ENST00000584773 LSM1O15116 133 aaKnown RBP16.41■□□□□ 0.22
SRSF1-208ENST00000584773 CYP4B1P13584 511 aa16.41■□□□□ 0.22
SRSF1-208ENST00000584773 EFNA1P20827 205 aaPredicted RBP16.41■□□□□ 0.22
SRSF1-208ENST00000584773 ELAVL4P26378 380 aaKnown RBP16.41■□□□□ 0.22
SRSF1-208ENST00000584773 IL12BP29460 328 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms