RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CBX6O95503 412 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 EMDP50402 254 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 PRKAG1P54619 331 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 MLLT10P55197 1068 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 MLF1P58340 268 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 GABPB1Q06547 395 aaPredicted RBP14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 NFYCQ13952 458 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 TRMT5Q32P41 509 aaKnown RBP14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 COLEC12Q5KU26 742 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 RNF111Q6ZNA4 994 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 SZRD1Q7Z422 152 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 DHDDSQ86SQ9 333 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 MSRB3Q8IXL7 192 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 OR56A1Q8NGH5 318 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 ZFP90Q8TF47 636 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 GIMAP5Q96F15 307 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 NSL1Q96IY1 281 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 UTP23Q9BRU9 249 aaKnown RBP14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 SLC35A5Q9BS91 424 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 CDCP1Q9H5V8 836 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 EFCAB1Q9HAE3 211 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 SLC25A37Q9NYZ2 338 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 PLA2G3Q9NZ20 509 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 VAPAQ9P0L0 249 aa14.78□□□□□ -0.04
CSNK1D-223ENST00000584472 OR6C76A6NM76 312 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 NME6O75414 186 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 UBOX5O94941 541 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 NPPAP01160 153 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 C1QCP02747 245 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 T-ENOLP0DO92 83 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 ESRRAP11474 423 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 TRHRP34981 398 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 CPA2P48052 419 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 TP53BP2Q13625 1128 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 TUBA3CQ13748 450 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 SAXO2Q658L1 398 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 TUBA3EQ6PEY2 450 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 BHLHB9Q6PI77 547 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 C6orf120Q7Z4R8 191 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 C9orf40Q8IXQ3 194 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 HORMAD2Q8N7B1 307 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 C16orf52Q8NHV5 167 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 NEURL3Q96EH8 262 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 MS4A4EQ96PG1 132 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.77□□□□□ -0.055e-10■■■■■ 29.9
CSNK1D-223ENST00000584472 IL1RL2Q9HB29 575 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 RYDENQ9NUL5 291 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 GPATCH2Q9NW75 528 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 PRODH2Q9UF12 536 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 CFL2Q9Y281 166 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 PCDHGB6Q9Y5F9 930 aa14.77□□□□□ -0.05
CSNK1D-223ENST00000584472 DOPEY2Q9Y3R5 2298 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 FXYD1O00168 92 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 PRKNO60260 465 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 MAN1A2O60476 641 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 HMGN2P05204 90 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 CALB2P22676 271 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 CHI3L1P36222 383 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 NUDT2P50583 147 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 RNF4P78317 190 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 EBPQ15125 230 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 INAQ16352 499 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 RUNDC3AQ59EK9 446 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 RPUSD3Q6P087 351 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 MDS2Q8NDY4 140 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 CATSPER1Q8NEC5 780 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 OR5L2Q8NGL0 311 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 ROPN1LQ96C74 230 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 LRRC58Q96CX6 371 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 AURKBQ96GD4 344 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 VSTM2LQ96N03 204 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 ANKRD27Q96NW4 1050 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 CGREF1Q99674 301 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 TRIM45Q9H8W5 580 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 TPT1P8Q9HAU6 139 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 FOLH1BQ9HBA9 442 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 GID8Q9NWU2 228 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 LUZP4Q9P127 313 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 MYOTQ9UBF9 498 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 DTX4Q9Y2E6 619 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 YARS2Q9Y2Z4 477 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 GMEB1Q9Y692 573 aa14.76□□□□□ -0.05
CSNK1D-223ENST00000584472 TMEM200CA6NKL6 621 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 CLIC1O00299 241 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 F10P00742 488 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 CD96P40200 585 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 PRIM2P49643 509 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 HLCSP50747 726 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 MNAT1P51948 309 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 ART3Q13508 389 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 CAPRIN1Q14444 709 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 LASP1Q14847 261 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 INPP5JQ15735 1006 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 EXOSC6Q5RKV6 272 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 MFSD12Q6NUT3 480 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 C8orf82Q6P1X6 216 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 ZCCHC12Q6PEW1 402 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 HACD2Q6Y1H2 254 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 SLC29A4Q7RTT9 530 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 NUBPLQ8TB37 319 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms