RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ZNF808Q8N4W9 903 aaPredicted RBP24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 CEP70Q8NHQ1 597 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 PHF10Q8WUB8 498 aaKnown RBP24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 HGDQ93099 445 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 SARAFQ96BY9 339 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 TLCD1Q96CP7 247 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 TP63Q9H3D4 680 aaPredicted RBP24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 C3orf14Q9HBI5 128 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 Q9N2J8 555 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 ACKR4Q9NPB9 350 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 ARGLU1Q9NWB6 273 aaPredicted RBP24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 NOP53Q9NZM5 478 aaKnown RBP24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 KLRF1Q9NZS2 232 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 HAO1Q9UJM8 370 aa24.91■■□□□ 1.58
SMARCD2-210ENST00000584400 ASH1LQ9NR48 2969 aaKnown RBP24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 TRGV5A0A0B4J1U4 118 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 LRRC3CA6NJW4 275 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 AQP7O14520 342 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 SCAMP2O15127 329 aaKnown RBP24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 UGT2B11O75310 529 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 FRKP42685 505 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 PNLIPRP2P54317 469 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 BST1Q10588 318 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 CYP27C1Q4G0S4 372 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 ATG16L1Q676U5 607 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 XKRXQ6PP77 449 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 ZNF551Q7Z340 670 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 MRGPRGQ86SM5 289 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 CD163Q86VB7 1156 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 RAB3IL1Q8TBN0 382 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 CIDECQ96AQ7 238 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 DTNBP1Q96EV8 351 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 C1orf50Q9BV19 199 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 OSBPL11Q9BXB4 747 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 ZNF395Q9H8N7 513 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 GIMAP2Q9UG22 337 aa24.9■■□□□ 1.58
SMARCD2-210ENST00000584400 PSMG1O95456 288 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 AGAP20933 346 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 GDF1P27539 372 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 PSMD4P55036 377 aaKnown RBP24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 PSG6Q00889 435 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 MLC1Q15049 377 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 VPS26BQ4G0F5 336 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 CPTPQ5TA50 214 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 BICRALQ6AI39 1079 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 TMEM211Q6ICI0 200 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 LRRC34Q8IZ02 419 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 ADOQ96SZ5 270 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 SORT1Q99523 831 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 C20orf27Q9GZN8 174 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 THAP1Q9NVV9 213 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 ASIC5Q9NY37 505 aa24.89■■□□□ 1.58
SMARCD2-210ENST00000584400 SVILO95425 2214 aa24.89■■□□□ 1.57
SMARCD2-210ENST00000584400 PRAMEF25A6NGN4 478 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 NPIPA2E9PIF3 369 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 NPIPA3F8WFD2 350 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 RFPL3SP0C7P2 107 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 WDR4P57081 412 aaKnown RBP24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 PTGR1Q14914 329 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 ZNF385BQ569K4 471 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 AGBL2Q5U5Z8 902 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 NPSR1Q6W5P4 371 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 LARP4Q71RC2 724 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 OR1J4Q8NGS1 313 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 MGARPQ8TDB4 240 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 PHF12Q96QT6 1004 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 NODALQ96S42 347 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 LMF2Q9BU23 707 aaKnown RBP24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 ZGRF1Q86YA3 2104 aa24.88■■□□□ 1.57
SMARCD2-210ENST00000584400 FIGNL2A6NMB9 653 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 ZNHIT1O43257 154 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 TSPAN2O60636 221 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 NME6O75414 186 aaPredicted RBP24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 CLDN1O95832 211 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 CELA3AP09093 270 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 PRR5P85299 388 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 DECR1Q16698 335 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 WLSQ5T9L3 541 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 TIGD3Q6B0B8 471 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 ITLN2Q8WWU7 325 aaPredicted RBP24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 ACAD8Q9UKU7 415 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 CBLCQ9ULV8 474 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 C15orf41Q9Y2V0 281 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 LIPGQ9Y5X9 500 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 LRRK2Q5S007 2527 aa24.87■■□□□ 1.57
SMARCD2-210ENST00000584400 A0A1W2PRB8 838 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 ICOSLGO75144 302 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 TRAPPC6AO75865 159 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 ART3Q13508 389 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 LSM12Q3MHD2 195 aaKnown RBP24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 GXYLT1Q4G148 440 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 ANGPTL8Q6UXH0 198 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 SZRD1Q7Z422 152 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 CDRT4Q8N9R6 151 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 PPP1R36Q96LQ0 422 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 GNRHR2Q96P88 292 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 MS4A4EQ96PG1 132 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 AKTIPQ9H8T0 292 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 NTMQ9P121 344 aa24.86■■□□□ 1.57
SMARCD2-210ENST00000584400 HIVEP3Q5T1R4 2406 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms