RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 POLR2FP61218 127 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 MRPS6P82932 125 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 HTD2P86397 168 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 DPYSQ14117 519 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 MS4A13Q5J8X5 152 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 TCTEX1D4Q5JR98 221 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 C12orf60Q5U649 245 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 PNCKQ6P2M8 343 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 Q7L0L9 218 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 ADCK1Q86TW2 530 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 SLC22A18ASQ8N1D0 253 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 FGFRL1Q8N441 504 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 TBCKQ8TEA7 893 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 CRYGNQ8WXF5 182 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 TAF4BQ92750 862 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 TBC1D31Q96DN5 1066 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 DNAJA3Q96EY1 480 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 RPP25Q9BUL9 199 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 WRAP53Q9BUR4 548 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 KAT8Q9H7Z6 458 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 AMBNQ9NP70 447 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 DCAF13Q9NV06 445 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 MBD2Q9UBB5 411 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 GHRLQ9UBU3 117 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 ISY1Q9ULR0 285 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 NCAPD2Q15021 1401 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 RALGAPA1Q6GYQ0 2036 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 HCFC1P51610 2035 aa3.65□□□□□ -1.82
SMCHD1-205ENST00000581383 FAM230AA0A1W2PPH8 454 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 TTC26A0AVF1 554 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ANKRD30BLA7E2S9 258 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 NPIPA2E9PIF3 369 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 E9PMD0 336 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 C11orf98E9PRG8 122 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 H3BTX0 84 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 SGK494L7N484 410 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 PDXKO00764 312 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 SCGB2A1O75556 95 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 TOM1L1O75674 476 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 TOXO94900 526 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 IGHV3-9P01782 118 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 CA3P07451 260 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 SNRPCP09234 159 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 FAM200BP0CF97 657 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 GSTT2P0CG29 244 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 GSTT2BP0CG30 244 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 BCL3P20749 454 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 HTR5AP47898 357 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 POU3F4P49335 361 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 GPC3P51654 580 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 IST1P53990 364 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF33BQ06732 778 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ZP4Q12836 540 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 EIF2B1Q14232 305 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ADPRMQ3LIE5 342 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 SLC22A6Q4U2R8 563 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 HIGD2BQ4VC39 106 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 EIPR1Q53HC9 387 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 DMKNQ6E0U4 476 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 SPINK14Q6IE38 97 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF562Q6V9R5 426 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ERASQ7Z444 233 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 CEACAM19Q7Z692 300 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 VPS36Q86VN1 386 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 CERS5Q8N5B7 392 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 TRIM9Q9C026 710 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ECT2Q9H8V3 914 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 VAT1LQ9HCJ6 419 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 HPF1Q9NWY4 346 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 KLRF1Q9NZS2 232 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF581Q9P0T4 197 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 ATXN10Q9UBB4 475 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 MGAT4BQ9UQ53 548 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 DHRS7Q9Y394 339 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 CUX2O14529 1486 aa3.65□□□□□ -1.83
SMCHD1-205ENST00000581383 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 CCT8L1PA6NM43 557 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 SAP18O00422 153 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 GPRIN2O60269 458 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 SRPX2O60687 465 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF253O75346 499 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 VPS26AO75436 327 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 PIGRP01833 764 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 PAICSP22234 425 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 PPIAP62937 165 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 LTB4RQ15722 352 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 ZIC1Q15915 447 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 LEG1Q6P5S2 330 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 LPCAT2Q7L5N7 544 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 CATSPER4Q7RTX7 472 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 NET1Q7Z628 596 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 MISPQ8IVT2 679 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 CCDC36Q8IYA8 594 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 NFAM1Q8NET5 270 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 CCDC110Q8TBZ0 833 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 GIPC3Q8TF64 312 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 SLC25A36Q96CQ1 311 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 PIWIL1Q96J94 861 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 MCCC1Q96RQ3 725 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms