RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 VWA5B2Q8N398 1253 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 ZNF540Q8NDQ6 660 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 FAM81AQ8TBF8 368 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 GPR151Q8TDV0 419 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 OIT3Q8WWZ8 545 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 CDS1Q92903 461 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 RIT1Q92963 219 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 ANKRD9Q96BM1 317 aaPredicted RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 OR1F2PQ96R84 312 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 SDF2Q99470 211 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 BARD1Q99728 777 aaKnown RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 BCL7BQ9BQE9 202 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 NDC1Q9BTX1 674 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 G6PC3Q9BUM1 346 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 NLGN3Q9NZ94 848 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 MRTO4Q9UKD2 239 aaKnown RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 MRPS2Q9Y399 296 aaKnown RBP10.4□□□□□ -0.74
SKA2-204ENST00000578519 PCDHGB1Q9Y5G3 927 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 RNF215Q9Y6U7 377 aa10.4□□□□□ -0.74
SKA2-204ENST00000578519 IGHV1OR21-1A0A087WYE8 117 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 MYOCOSA0A1B0GUC4 107 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SH3PXD2BA1X283 911 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 PRAMEF27A3QJZ7 478 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 TMEM150CB9EJG8 249 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 PTGES3LE9PB15 166 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 PRAMEF2O60811 474 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SDC3O75056 442 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 TRMUO75648 421 aaKnown RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 OR2B3O76000 313 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 NKX2-2O95096 273 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 OR5F1O95221 314 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CPNE6O95741 557 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 GASTP01350 101 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 MSL3P1P0C860 447 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 TNNI3P19429 210 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 ITIH1P19827 911 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 ELAVL4P26378 380 aaKnown RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 HOXD12P35452 270 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 STT3AP46977 705 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 TMBIM6P55061 237 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 IGLV3-21P80748 117 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 ZXDAP98168 799 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 NR0B2Q15466 257 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 NPTX1Q15818 432 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 DEFB110Q30KQ9 67 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CYP27C1Q4G0S4 372 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 DCST2Q5T1A1 773 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 FOXB2Q5VYV0 432 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 PLEKHM3Q6ZWE6 761 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 MED25Q71SY5 747 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 PRSS42Q7Z5A4 293 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 SFTPA2Q8IWL1 248 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CDK20Q8IZL9 346 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SPARTQ8N0X7 666 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SLC16A11Q8NCK7 471 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 OR7G1Q8NGA0 311 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 OR5T3Q8NGG3 340 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 RHOXF1Q8NHV9 184 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 C9orf43Q8TAL5 461 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 CEP76Q8TAP6 659 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 PIGXQ8TBF5 258 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 RORBQ92753 470 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SLC35B4Q969S0 331 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 ART5Q96L15 291 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 ALOXE3Q9BYJ1 711 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SAP130Q9H0E3 1048 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 DUSP21Q9H596 190 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 Q9N2J8 555 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 STARD5Q9NSY2 213 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CUTCQ9NTM9 273 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SEMA5BQ9P283 1151 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 A4GNTQ9UNA3 340 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 ZNF443Q9Y2A4 671 aaPredicted RBP10.39□□□□□ -0.75
SKA2-204ENST00000578519 CEPT1Q9Y6K0 416 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 SLCO1B1Q9Y6L6 691 aa10.39□□□□□ -0.75
SKA2-204ENST00000578519 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 CEP290O15078 2479 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 IRGMA1A4Y4 181 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 EME2A4GXA9 379 aaPredicted RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 EFCAB10A6NFE3 127 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 PRAMEF25A6NGN4 478 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 AGAP5A6NIR3 686 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 ZNF99A8MXY4 864 aaPredicted RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 E9PQ18 207 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FAM227AF5H4B4 570 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 H3BN98 237 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 H3BSA7 217 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 M0R3G1 203 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 M0R3H8 397 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FOXS1O43638 330 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FMO6PO60774 539 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 CYP7B1O75881 506 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 IFNA16P05015 189 aa10.38□□□□□ -0.75
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