RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 CCNYL2Q5T2Q4 361 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FAM71E1Q6IPT2 247 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GALNT18Q6P9A2 607 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 Q6ZSR9 355 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 Q71RC1 249 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SLC29A4Q7RTT9 530 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 NUP54Q7Z3B4 507 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MAATS1Q7Z4T9 603 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 BTLAQ7Z6A9 289 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ATG4DQ86TL0 474 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GGNQ86UU5 652 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MYLK4Q86YV6 388 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 LACC1Q8IV20 430 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CCDC116Q8IYX3 515 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GCNT2Q8N0V5 402 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CDYL2Q8N8U2 506 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MYRIPQ8NFW9 859 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 OR2M3Q8NG83 312 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 OR7G1Q8NGA0 311 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 OR2T11Q8NH01 316 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 RDH11Q8TC12 318 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 POC1BQ8TC44 478 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 C16orf78Q8WTQ4 265 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FIG4Q92562 907 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CDKL2Q92772 493 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 NINJ1Q92982 152 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ABTB1Q969K4 478 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GIMAP5Q96F15 307 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF845Q96IR2 970 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 LCORQ96JN0 433 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ADGRG7Q96K78 797 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FCRL1Q96LA6 429 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 WFIKKN1Q96NZ8 548 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ALPK1Q96QP1 1244 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 TRIB1Q96RU8 372 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF382Q96SR6 550 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ADOQ96SZ5 270 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MRPL57Q9BQC6 102 aaKnown RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 EBPLQ9BY08 206 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 POLDIP3Q9BY77 421 aaKnown RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MRPL46Q9H2W6 279 aaKnown RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 LDAHQ9H6V9 325 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 RUBCNLQ9H714 662 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CALHM2Q9HA72 323 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FOLH1BQ9HBA9 442 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SIRT5Q9NXA8 310 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF629Q9UEG4 869 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF180Q9UJW8 692 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ING1Q9UK53 422 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 ADAM21Q9UKJ8 722 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SLC12A4Q9UP95 1085 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MAPRE3Q9UPY8 281 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 DLGAP4Q9Y2H0 992 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 TESMINQ9Y4I5 508 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 NUP214P35658 2090 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 DSCAMO60469 2012 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CR1P17927 2039 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 IGLV3-32A0A0A0MS00 114 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 C1orf226A1L170 272 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 SERTM1A2A2V5 107 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 SYNDIG1LA6NDD5 238 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PABPN1LA6NDY0 278 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PRAMEF25A6NGN4 478 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 OR6C70A6NIJ9 312 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 SYCE1LA8MT33 242 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 KIAA1324LA8MWY0 1029 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 POC1B-GALNT4F8VUJ3 575 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GOLGA8RI6L899 631 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 KLF4O43474 513 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PLOD3O60568 738 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TRAPPC6AO75865 159 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 IL18BPO95998 194 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PLAUP00749 431 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PROCP04070 461 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 S100BP04271 92 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 THBS1P07996 1170 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 RHOXF2BP0C7M4 288 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 COL6A2P12110 1019 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 COX7A2P14406 83 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CD1EP15812 388 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CSNK2A2P19784 350 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 IMPDH1P20839 514 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TCEA1P23193 301 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GRK2P25098 689 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PIK3R1P27986 724 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CASQ1P31415 396 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TIA1P31483 386 aaKnown RBP eCLIP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 HPDP32754 393 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 MC3RP41968 323 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 FRKP42685 505 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CCNG1P51959 295 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PRKAA2P54646 552 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 ILF2Q12905 390 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 BIKQ13323 160 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GAB1Q13480 694 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 DEFB113Q30KQ7 82 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 UGT3A2Q3SY77 523 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TBCELQ5QJ74 424 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TMEM198Q66K66 360 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms