RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FGD2Q7Z6J4 655 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 LRRC34Q8IZ02 419 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 GOLGA6L1Q8N7Z2 621 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 OR7A2PQ8NGA2 310 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 CEP70Q8NHQ1 597 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 TMCO6Q96DC7 493 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 ATP6V1G3Q96LB4 118 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 NUF2Q9BZD4 464 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 MANSC1Q9H8J5 431 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 VIPAS39Q9H9C1 493 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 QPCTLQ9NXS2 382 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 TINAGQ9UJW2 476 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 MAPRE3Q9UPY8 281 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 DOPEY2Q9Y3R5 2298 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 LRRC3CA6NJW4 275 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 TTC36A6NLP5 189 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 UGT2B11O75310 529 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 IGHG3P01860 377 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 G6PDP11413 515 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 ESRRAP11474 423 aaPredicted RBP21.54■■□□□ 1.04
SNF8-217ENST00000576353 MASP1P48740 699 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 MRPS22P82650 360 aaKnown RBP21.54■■□□□ 1.04
SNF8-217ENST00000576353 PSG6Q00889 435 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 EFR3AQ14156 821 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 MLC1Q15049 377 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 CYP27C1Q4G0S4 372 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 BICRALQ6AI39 1079 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 SLC30A6Q6NXT4 461 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 NPSR1Q6W5P4 371 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 EID3Q8N140 333 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 FAM57AQ8TBR7 257 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 SLC35A4Q96G79 324 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 ZNF703Q9H7S9 590 aaPredicted RBP21.54■■□□□ 1.04
SNF8-217ENST00000576353 C3orf14Q9HBI5 128 aa21.54■■□□□ 1.04
SNF8-217ENST00000576353 A0A1W2PRB8 838 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 ZNHIT1O43257 154 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 SUSD5O60279 629 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 RFPL3SP0C7P2 107 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 IL12BP29460 328 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 PNLIPRP2P54317 469 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 CLDN8P56748 225 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 C21orf58P58505 322 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 LARP4Q71RC2 724 aaKnown RBP eCLIP21.53■■□□□ 1.042e-6■■□□□ 12.5
SNF8-217ENST00000576353 TRILQ7L0X0 811 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 DOLPP1Q86YN1 238 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 RIMKLAQ8IXN7 391 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 COQ8BQ96D53 544 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 NODALQ96S42 347 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 ADOQ96SZ5 270 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 LDAHQ9H6V9 325 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 MEAF6Q9HAF1 191 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 Q9N2J8 555 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 NTMQ9P121 344 aa21.53■■□□□ 1.04
SNF8-217ENST00000576353 HECTD1Q9ULT8 2610 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 A0A1B0GVC2 190 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 OR14I1A6ND48 311 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 SLCO1B7G3V0H7 640 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 TSPAN2O60636 221 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 HCN1O60741 890 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 ZG16O60844 167 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 TPOP07202 933 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 LAMP1P11279 417 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 LBPP18428 481 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 VPS26BQ4G0F5 336 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 KRTCAP2Q8N6L1 136 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 NUP43Q8NFH3 380 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 TMEM41AQ96HV5 264 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 LMF2Q9BU23 707 aaKnown RBP21.52■■□□□ 1.04
SNF8-217ENST00000576353 OSBPL11Q9BXB4 747 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 ACKR4Q9NPB9 350 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 KLRF1Q9NZS2 232 aa21.52■■□□□ 1.04
SNF8-217ENST00000576353 MRTO4Q9UKD2 239 aaKnown RBP21.52■■□□□ 1.04
SNF8-217ENST00000576353 USP9YO00507 2555 aaPredicted RBP21.51■■□□□ 1.03
SNF8-217ENST00000576353 PTPN13Q12923 2485 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 PRAMEF25A6NGN4 478 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 TRPC5OSA6NMA1 111 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 KLF11O14901 512 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 HDAC3O15379 428 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 EMC8O43402 210 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 ICOSLGO75144 302 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 CELA3AP09093 270 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 GP1BBP13224 206 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 ELAVL4P26378 380 aaKnown RBP21.51■■□□□ 1.03
SNF8-217ENST00000576353 MAN2A2P49641 1150 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 CDK9P50750 372 aaKnown RBP21.51■■□□□ 1.03
SNF8-217ENST00000576353 PRKAG1P54619 331 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 DECR1Q16698 335 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 LSM12Q3MHD2 195 aaKnown RBP21.51■■□□□ 1.03
SNF8-217ENST00000576353 DESI1Q6ICB0 168 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 OR4N2Q8NGD1 307 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 OR5P2Q8WZ92 322 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 NTNG2Q96CW9 530 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 CCDC120Q96HB5 630 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 BHLHE41Q9C0J9 482 aaPredicted RBP21.51■■□□□ 1.03
SNF8-217ENST00000576353 EXO5Q9H790 373 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 CBLCQ9ULV8 474 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 MEMO1Q9Y316 297 aa21.51■■□□□ 1.03
SNF8-217ENST00000576353 TRGV5A0A0B4J1U4 118 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 AQP7O14520 342 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 EFNA1P20827 205 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms