RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 HGDQ93099 445 aa19■□□□□ 0.63
HCFC1R1-208ENST00000575214 SH3GL2Q99962 352 aa19■□□□□ 0.63
HCFC1R1-208ENST00000575214 TINAGQ9UJW2 476 aa19■□□□□ 0.63
HCFC1R1-208ENST00000575214 ZNF835Q9Y2P0 537 aa19■□□□□ 0.63
HCFC1R1-208ENST00000575214 SPTAN1Q13813 2472 aaKnown RBP19■□□□□ 0.63
HCFC1R1-208ENST00000575214 USP9YO00507 2555 aaPredicted RBP18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 LRRC3CA6NJW4 275 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 PSMG1O95456 288 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 LBPP18428 481 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 CASP3P42574 277 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 PRKAG1P54619 331 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 DIO3P55073 304 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 PSG6Q00889 435 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 ARHGAP11AQ6P4F7 1023 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 Q6ZPB1 254 aaPredicted RBP18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 WDR53Q7Z5U6 358 aaPredicted RBP18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 CHERPQ8IWX8 916 aaKnown RBP18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 OR4N2Q8NGD1 307 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 RELTQ969Z4 430 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 COL21A1Q96P44 957 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 NODALQ96S42 347 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 ADOQ96SZ5 270 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 ANGPTL4Q9BY76 406 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 EQTNQ9NQ60 294 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 PLSCR2Q9NRY7 297 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 KLRF1Q9NZS2 232 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 B4GALT7Q9UBV7 327 aa18.99■□□□□ 0.63
HCFC1R1-208ENST00000575214 A0A1W2PRB8 838 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 OR6C70A6NIJ9 312 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 CCL21O00585 134 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 HDAC3O15379 428 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 ABCB7O75027 752 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 TRIM3O75382 744 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 SNX4O95219 450 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 PTGS2P35354 604 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 CLDN8P56748 225 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 OCRLQ01968 901 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 SLC10A1Q14973 349 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 LARP4Q71RC2 724 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■□□□ 11.6
HCFC1R1-208ENST00000575214 FGD2Q7Z6J4 655 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 PACS2Q86VP3 889 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 NUP43Q8NFH3 380 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 NUDT8Q8WV74 236 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 ZNF75CPQ92670 426 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 TMCO6Q96DC7 493 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 SLC35A4Q96G79 324 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 ZNF703Q9H7S9 590 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 C3orf14Q9HBI5 128 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 Q9N2J8 555 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 SUCOQ9UBS9 1254 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 LIPGQ9Y5X9 500 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 EML6Q6ZMW3 1958 aa18.98■□□□□ 0.63
HCFC1R1-208ENST00000575214 TRPC5OSA6NMA1 111 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 HMGB1P1B2RPK0 211 aaPredicted RBP18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 SDHDO14521 159 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 PRRG2O14669 202 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 CELA3AP09093 270 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 RFPL3SP0C7P2 107 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 GDF1P27539 372 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 EFR3AQ14156 821 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 MLC1Q15049 377 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 WDR75Q8IWA0 830 aaKnown RBP18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 RIMKLAQ8IXN7 391 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 LRRC34Q8IZ02 419 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 NATD1Q8N6N6 113 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 CEP70Q8NHQ1 597 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 EFHD2Q96C19 240 aaPredicted RBP18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 COQ8BQ96D53 544 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 OSBPL11Q9BXB4 747 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 DPY30Q9C005 99 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 LDAHQ9H6V9 325 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 CBLCQ9ULV8 474 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 MAPRE3Q9UPY8 281 aa18.97■□□□□ 0.63
HCFC1R1-208ENST00000575214 WIPF3A6NGB9 483 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 PRAMEF25A6NGN4 478 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 SLCO1B7G3V0H7 640 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 KLF11O14901 512 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 EMC8O43402 210 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 TSPAN2O60636 221 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 TPOP07202 933 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 ESRRAP11474 423 aaPredicted RBP18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 C21orf58P58505 322 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 PGS1Q32NB8 556 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 SLC30A6Q6NXT4 461 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 TMEM81Q6P7N7 255 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 CD163Q86VB7 1156 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 OR5P2Q8WZ92 322 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 MS4A4EQ96PG1 132 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 PSMG3-AS1Q96PY0 264 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 LMF2Q9BU23 707 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 DUSP26Q9BV47 211 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 BHLHE41Q9C0J9 482 aaPredicted RBP18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 EXO5Q9H790 373 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 GALNT9Q9HCQ5 603 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 SNX8Q9Y5X2 465 aa18.96■□□□□ 0.63
HCFC1R1-208ENST00000575214 GOLGA8QA0A0J9YX86 632 aa18.95■□□□□ 0.62
HCFC1R1-208ENST00000575214 GOLGA8OA6NCC3 632 aa18.95■□□□□ 0.62
HCFC1R1-208ENST00000575214 TTC36A6NLP5 189 aa18.95■□□□□ 0.62
HCFC1R1-208ENST00000575214 GOLGA8NF8WBI6 632 aa18.95■□□□□ 0.62
HCFC1R1-208ENST00000575214 GNB5O14775 395 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms