RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RDH14Q9HBH5 336 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SPHK1Q9NYA1 384 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 NKIRAS2Q9NYR9 191 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 TEKT2Q9UIF3 430 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 HCN4Q9Y3Q4 1203 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 TDRD6O60522 2096 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 C1orf226A1L170 272 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 FAM171A2A8MVW0 826 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 PLPP1O14494 284 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 TMPRSS11DO60235 418 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 B4GALT2O60909 372 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 GYPBP06028 91 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 FUT1P19526 365 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ALAS2P22557 587 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ETV6P41212 452 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SLC6A12P48065 614 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 FBXW4P57775 412 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 PUM1Q14671 1186 aaKnown RBP eCLIP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 LARS2Q15031 903 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CDKN3Q16667 212 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 HNRNPA1L2Q32P51 320 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF311Q5JNZ3 666 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ATAT1Q5SQI0 421 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 PDZK1Q5T2W1 519 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CDC73Q6P1J9 531 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 LAS2Q8IYD9 372 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 FAM46AQ96IP4 442 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 LRR1Q96L50 414 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SRMSQ9H3Y6 488 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CD93Q9NPY3 652 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 PTGFRNQ9P2B2 879 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 DKK3Q9UBP4 350 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CFL2Q9Y281 166 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CSNK1G3Q9Y6M4 447 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 STON1Q9Y6Q2 735 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF780BQ9Y6R6 833 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 MN1Q10571 1320 aaPredicted RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 TRBV5-4A0A0C4DH59 114 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 C2orf92A0A1B0GVN3 265 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 GFYI3L273 518 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 CACNB4O00305 520 aaPredicted RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 QSOX1O00391 747 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 LANCL1O43813 399 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 TNFRSF21O75509 655 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 MPC1LP0DKB6 136 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 PRKACBP22694 351 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ETV5P41161 510 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ETV1P50549 477 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 CTBP2P56545 445 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ERVK-21P61565 698 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 RPS25P62851 125 aaKnown RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 NCF4Q15080 339 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 TEAD4Q15561 434 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF791Q3KP31 576 aaPredicted RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 MLIPQ5VWP3 458 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ZDHHC20Q5W0Z9 365 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 PLAG1Q6DJT9 500 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 C19orf48Q6RUI8 117 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ASB18Q6ZVZ8 466 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 NUDT13Q86X67 352 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 VRK2Q86Y07 508 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 KLHDC8AQ8IYD2 350 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 L3MBTL4Q8NA19 623 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 OR6C4Q8NGE1 309 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 HERVK_113Q902F9 699 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 FATE1Q969F0 183 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 TESCQ96BS2 214 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 EPYCQ99645 322 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 RACGAP1Q9H0H5 632 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 MED20Q9H944 212 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 IL21RQ9HBE5 538 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 PLCXD1Q9NUJ7 323 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 LSM2Q9Y333 95 aaKnown RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 KLK4Q9Y5K2 254 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 DOCK9Q9BZ29 2069 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 KIF26AQ9ULI4 1882 aaPredicted RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 EDDM13A0A1B0GTR0 161 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ZC3H12DA2A288 527 aaKnown RBP8.03□□□□□ -1.12
RPAIN-215ENST00000575112 POM121BA6NF01 834 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 TEX46H3BTG2 121 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 OR10H2O60403 315 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 HPGDSO60760 199 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 REM1O75628 298 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 NUDT14O95848 222 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 LALBAP00709 142 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 APODP05090 189 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 YES1P07947 543 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 CELP19835 753 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 CPN2P22792 545 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 C9orf50Q5SZB4 431 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 IL20RBQ6UXL0 311 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF547Q8IVP9 402 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 DCUN1D3Q8IWE4 304 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 CPXM2Q8N436 756 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 OR4D11Q8NGI4 311 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 OR52P1PQ8NH57 321 aa8.03□□□□□ -1.12
RPAIN-215ENST00000575112 ZFPM2Q8WW38 1151 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms