RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NLKQ9UBE8 527 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 SSR2P43308 183 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 AVPR1BP47901 424 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 TAS2R41P59536 307 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 IL18Q14116 193 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 SYCE2Q6PIF2 218 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 LSRQ86X29 649 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-206ENST00000573852 MARCH9Q86YJ5 346 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 DUSP18Q8NEJ0 188 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 ZC3HAV1LQ96H79 300 aaKnown RBP17.91■□□□□ 0.46
SCARF1-206ENST00000573852 LRRC3BQ96PB8 259 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 SLC38A2Q96QD8 506 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 BBS4Q96RK4 519 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 MACROD1Q9BQ69 325 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 KLHL31Q9H511 634 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 SEMA4GQ9NTN9 838 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 ADAM29Q9UKF5 820 aa17.91■□□□□ 0.46
SCARF1-206ENST00000573852 HIDE1A8MVS5 230 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 CPNE3O75131 537 aaKnown RBP17.9■□□□□ 0.46
SCARF1-206ENST00000573852 ERAL1O75616 437 aaKnown RBP17.9■□□□□ 0.46
SCARF1-206ENST00000573852 CELP19835 753 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 VASPP50552 380 aaPredicted RBP17.9■□□□□ 0.46
SCARF1-206ENST00000573852 CDH11P55287 796 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 TAS2R38P59533 333 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 CSNK1G2P78368 415 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 FAPQ12884 760 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 TSPAN31Q12999 210 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 NOGQ13253 232 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 COL9A2Q14055 689 aaPredicted RBP17.9■□□□□ 0.46
SCARF1-206ENST00000573852 C9orf64Q5T6V5 341 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 SLC39A5Q6ZMH5 540 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 LINC01555Q8NAE3 123 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 JPH3Q8WXH2 748 aaPredicted RBP17.9■□□□□ 0.46
SCARF1-206ENST00000573852 NECTIN4Q96NY8 510 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 PINK1Q9BXM7 581 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 LIPT1Q9Y234 373 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 PCDHGB7Q9Y5F8 929 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 A0A1W2PS29 197 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 CPSF4LA6NMK7 179 aaKnown RBP17.9■□□□□ 0.46
SCARF1-206ENST00000573852 NOTOA8MTQ0 251 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 PRRT4C9JH25 899 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 GABRPO00591 440 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 MAN2B1O00754 1011 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 PGRMC2O15173 223 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 DRD2P14416 443 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 RPA4Q13156 261 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 CAMK2BQ13554 666 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 SLC30A6Q6NXT4 461 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 ADCK2Q7Z695 626 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 POGLUT1Q8NBL1 392 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 OR4Q3Q8NH05 313 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 UPRTQ96BW1 309 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 ZNF649Q9BS31 505 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 NT5DC2Q9H857 520 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 KLHL21Q9UJP4 597 aa17.9■□□□□ 0.46
SCARF1-206ENST00000573852 C2orf92A0A1B0GVN3 265 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 ABHD14A-ACY1A0A1B0GW23 586 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 CASC3O15234 703 aaKnown RBP17.89■□□□□ 0.45
SCARF1-206ENST00000573852 LYRM1O43325 122 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 ACP5P13686 325 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 GNSP15586 552 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 ZNF791Q3KP31 576 aaPredicted RBP17.89■□□□□ 0.45
SCARF1-206ENST00000573852 RASSF6Q6ZTQ3 369 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 VRK2Q86Y07 508 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 CADM2Q8N3J6 435 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 OR7G1Q8NGA0 311 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 GRPEL2Q8TAA5 225 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 NEIL3Q8TAT5 605 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 ZFAND1Q8TCF1 268 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 TMEM43Q9BTV4 400 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 LGR4Q9BXB1 951 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 MYO7AQ13402 2215 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 IGKV1-8A0A0C4DH67 115 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 A0A0G2JPF8 293 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 LRIT2A6NDA9 550 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 HNRNPCL2B2RXH8 293 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 HNRNPCL3B7ZW38 293 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 C4orf51C9J302 202 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 ERVH48-1M5A8F1 160 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 DVL2O14641 736 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 PROM1O43490 865 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 HNRNPCL4P0DMR1 293 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 TRIM23P36406 574 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 NUMA1Q14980 2115 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 CCDC58Q4VC31 144 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 AADACL4Q5VUY2 407 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 KIAA1161Q6NSJ0 714 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 MZT2BQ6NZ67 158 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 LIX1LQ8IVB5 337 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 ING5Q8WYH8 240 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 COX14Q96I36 57 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 RNF32Q9H0A6 362 aa17.89■□□□□ 0.45
SCARF1-206ENST00000573852 FAM240BA0A1B0GVZ2 78 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 CD8B2A6NJW9 211 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 C8orf89P0DMQ9 161 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 PRKAR1AP10644 381 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 CD8BP10966 210 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 ERP29P30040 261 aaKnown RBP17.88■□□□□ 0.45
SCARF1-206ENST00000573852 NTSP30990 170 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms