RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 C11orf24Q96F05 449 aaPredicted RBP17.59■□□□□ 0.41
HCFC1R1-204ENST00000573095 VSTM2LQ96N03 204 aa17.59■□□□□ 0.41
HCFC1R1-204ENST00000573095 ZFP3Q96NJ6 502 aa17.59■□□□□ 0.41
HCFC1R1-204ENST00000573095 GIMAP4Q9NUV9 329 aa17.59■□□□□ 0.41
HCFC1R1-204ENST00000573095 WIF1Q9Y5W5 379 aa17.59■□□□□ 0.41
HCFC1R1-204ENST00000573095 EEF1E1-BLOC1S5C9J1V9 151 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 EEF1E1O43324 174 aaKnown RBP17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 RIPK2O43353 540 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 TSPAN2O60636 221 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 SRD5A2P31213 254 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 SLCO1A2P46721 670 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 PRKAA2P54646 552 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 GFRA1P56159 465 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 HEPACAMQ14CZ8 416 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 DAZAP2Q15038 168 aaPredicted RBP17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 ERCC6LQ2NKX8 1250 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 NPSR1Q6W5P4 371 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 TRMT10CQ7L0Y3 403 aaKnown RBP17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 IFNEQ86WN2 208 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 CDC20BQ86Y33 519 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 PLCZ1Q86YW0 608 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 OR14L1PQ8NHC6 308 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 ACMSDQ8TDX5 336 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 DTNBP1Q96EV8 351 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 APIPQ96GX9 242 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 UCN2Q96RP3 112 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 TUBA1CQ9BQE3 449 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 EPB41L4BQ9H329 900 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 LIME1Q9H400 295 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 ANKRA2Q9H9E1 313 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 CCM2LQ9NUG4 571 aaPredicted RBP17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 NFU1Q9UMS0 254 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 AKAP6Q13023 2319 aa17.58■□□□□ 0.4
HCFC1R1-204ENST00000573095 CCDC151A5D8V7 595 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 TUBAL3A6NHL2 446 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 H0Y3Z8 333 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 PLOD3O60568 738 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 ERN1O75460 977 aaKnown RBP17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 REM1O75628 298 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 GOSR1O95249 250 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 GSTA1P08263 222 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 TMIGD3P0DMS9 266 aaPredicted RBP17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 CORO7P57737 925 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 EFR3AQ14156 821 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 FAM9CQ8IZT9 166 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 CNPY4Q8N129 248 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 CHDHQ8NE62 594 aaPredicted RBP17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 C16orf78Q8WTQ4 265 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 KAT2AQ92830 837 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 TM9SF2Q99805 663 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 SFXN3Q9BWM7 321 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 STMN4Q9H169 189 aaPredicted RBP17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 FOLH1BQ9HBA9 442 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 SLC35C2Q9NQQ7 365 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 SIRT5Q9NXA8 310 aa17.57■□□□□ 0.4
HCFC1R1-204ENST00000573095 MED12LQ86YW9 2145 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 SERTM1A2A2V5 107 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 EPXP11678 715 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 IL12BP29460 328 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 KRT20P35900 424 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 LHX2P50458 406 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 DGKQP52824 942 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 SCIMPQ6UWF3 145 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 TRIM42Q8IWZ5 723 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 OR7G2Q8NG99 324 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 GOT1L1Q8NHS2 421 aaPredicted RBP17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 RDH11Q8TC12 318 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 KCNA7Q96RP8 456 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 ADOQ96SZ5 270 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 G6PC3Q9BUM1 346 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 TMUB1Q9BVT8 246 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 EBPLQ9BY08 206 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 GSTO2Q9H4Y5 243 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 TAS2R10Q9NYW0 307 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 SENP1Q9P0U3 644 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 PSMC3IPQ9P2W1 217 aaPredicted RBP17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 CLCF1Q9UBD9 225 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 FBXL2Q9UKC9 423 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 EDARQ9UNE0 448 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 MRPS18CQ9Y3D5 142 aaKnown RBP17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 TIMM22Q9Y584 194 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 MPDZO75970 2070 aa17.56■□□□□ 0.4
HCFC1R1-204ENST00000573095 HRNRQ86YZ3 2850 aaPredicted RBP17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 NME6O75414 186 aaPredicted RBP17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 RCBTB2O95199 551 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 DDCP20711 480 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 DNASE1P24855 282 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 MPIP34949 423 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 AGFG1P52594 562 aaKnown RBP17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 PNLIPRP2P54317 469 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 ZNF763Q0D2J5 394 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 AAGABQ6PD74 315 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 PAMR1Q6UXH9 720 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 LARP4Q71RC2 724 aaKnown RBP eCLIP17.55■□□□□ 0.42e-7■■□□□ 11.6
HCFC1R1-204ENST00000573095 TGIF2LYQ8IUE0 185 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 MZB1Q8WU39 189 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 WNT2BQ93097 391 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 ACBD3Q9H3P7 528 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 TAS2R9Q9NYW1 312 aa17.55■□□□□ 0.4
HCFC1R1-204ENST00000573095 DKKL1Q9UK85 242 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms