RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SLC44A2Q8IWA5 706 aaPredicted RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 DND1Q8IYX4 353 aaKnown RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 OR4N2Q8NGD1 307 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 OR8J2Q8NGG1 315 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 CEP70Q8NHQ1 597 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 FAR1Q8WVX9 515 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 OR5P2Q8WZ92 322 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 TMBIM1Q969X1 311 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 FAM120BQ96EK7 910 aaKnown RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 HSPBAP1Q96EW2 488 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 OTUB1Q96FW1 271 aaPredicted RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 SGCZQ96LD1 299 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 MS4A4EQ96PG1 132 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 SLX1AQ9BQ83 275 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 CXorf36Q9H7Y0 433 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 NEUROD4Q9HD90 331 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 SH2D2AQ9NP31 389 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 NPHS2Q9NP85 383 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 SACM1LQ9NTJ5 587 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 MAPRE3Q9UPY8 281 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 CHCHD2Q9Y6H1 151 aaPredicted RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 RP1L1Q8IWN7 2480 aaPredicted RBP14.53□□□□□ -0.08
CHD3-215ENST00000572750 SVILO95425 2214 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 AKAP9Q99996 3911 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 CAPN14A8MX76 684 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 UBDO15205 165 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 CFLARO15519 480 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 PPM1BO75688 479 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 P04436 131 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 ZNF24P17028 368 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 MST1P26927 711 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 IL12AP29459 219 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 PIGAP37287 484 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 DNASE1L1P49184 302 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 TDGF1P3P51864 188 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 HBA1P69905 142 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 PHC1P78364 1004 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 PSG6Q00889 435 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 MRPL49Q13405 166 aaKnown RBP14.53□□□□□ -0.08
CHD3-215ENST00000572750 SPDYE7PQ495Y7 208 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 PDCD4Q53EL6 469 aaKnown RBP14.53□□□□□ -0.08
CHD3-215ENST00000572750 RNFT1Q5M7Z0 435 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 BICRALQ6AI39 1079 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 ZNF324BQ6AW86 544 aaPredicted RBP14.53□□□□□ -0.08
CHD3-215ENST00000572750 ATCAYQ86WG3 371 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 SLC34A3Q8N130 599 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 FBXW8Q8N3Y1 598 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 NUP43Q8NFH3 380 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 OR2M7Q8NG81 312 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 OR9I1Q8NGQ6 314 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 OR5AK3PQ8NH89 298 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 RFWD2Q8NHY2 731 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 PAQR8Q8TEZ7 354 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 NR4A3Q92570 626 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 GIMAP5Q96F15 307 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 ZCCHC3Q9NUD5 404 aaKnown RBP14.53□□□□□ -0.08
CHD3-215ENST00000572750 DCTN4Q9UJW0 460 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 OR10H1Q9Y4A9 318 aa14.53□□□□□ -0.08
CHD3-215ENST00000572750 APCP25054 2843 aa14.52□□□□□ -0.08
CHD3-215ENST00000572750 KLRC4-KLRK1H3BQV0 150 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 RNASET2O00584 256 aaKnown RBP14.52□□□□□ -0.09
CHD3-215ENST00000572750 DYNC1I1O14576 645 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 TO15178 435 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 EMC8O43402 210 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 UGT2B11O75310 529 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 WISP2O76076 250 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 CRYABP02511 175 aaKnown RBP14.52□□□□□ -0.09
CHD3-215ENST00000572750 GNLYP22749 145 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 DGKQP52824 942 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 PRR5P85299 388 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 TP53BP2Q13625 1128 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 GSTA3Q16772 222 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 DPY19L1Q2PZI1 675 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 SLC22A10Q63ZE4 541 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 ZNF787Q6DD87 383 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 MFSD12Q6NUT3 480 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 CLEC4FQ8N1N0 589 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 NATD1Q8N6N6 113 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 OR4A15Q8NGL6 344 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 PSMA8Q8TAA3 256 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 JADE3Q92613 823 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 DIO2Q92813 273 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 EFHD2Q96C19 240 aaPredicted RBP14.52□□□□□ -0.09
CHD3-215ENST00000572750 ZBTB18Q99592 522 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 LMF2Q9BU23 707 aaKnown RBP14.52□□□□□ -0.09
CHD3-215ENST00000572750 C3orf14Q9HBI5 128 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 SDR39U1Q9NRG7 319 aaPredicted RBP14.52□□□□□ -0.09
CHD3-215ENST00000572750 FGFR1OP2Q9NVK5 253 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 NTMQ9P121 344 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 CNOT11Q9UKZ1 510 aaKnown RBP14.52□□□□□ -0.09
CHD3-215ENST00000572750 VPS4AQ9UN37 437 aa14.52□□□□□ -0.09
CHD3-215ENST00000572750 NUP214P35658 2090 aaPredicted RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 NCKAP5O14513 1909 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 FAM166BA8MTA8 275 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 TP53I11O14683 189 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 TFECO14948 347 aaPredicted RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 IL12BP29460 328 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 S100A3P33764 101 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 KCNJ2P63252 427 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms