RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 EQTNQ9NQ60 294 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 SLC6A13Q9NSD5 602 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FGFR1OP2Q9NVK5 253 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 DDX18Q9NVP1 670 aaKnown RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMG6-209ENST00000571442 GPATCH2Q9NW75 528 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 FBXO34Q9NWN3 711 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 TUBA8Q9NY65 449 aaPredicted RBP6.42□□□□□ -1.38
SMG6-209ENST00000571442 NTMQ9P121 344 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PRODH2Q9UF12 536 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 DCTN4Q9UJW0 460 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 PCDHGB6Q9Y5F9 930 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 LIPGQ9Y5X9 500 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 KCNE3Q9Y6H6 103 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 MED12Q93074 2177 aa6.42□□□□□ -1.38
SMG6-209ENST00000571442 GTF3C1Q12789 2109 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 ESPL1Q14674 2120 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 NOTCH2Q04721 2471 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 DNAJC13O75165 2243 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 ICE1Q9Y2F5 2266 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 C2orf72A6NCS6 295 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 FAM166BA8MTA8 275 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 RNASET2O00584 256 aaKnown RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 EMC8O43402 210 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 HS6ST1O60243 411 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 PPM1BO75688 479 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 GLSO94925 669 aaPredicted RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 CBX6O95503 412 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 CPSF4O95639 269 aaKnown RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 CELA3AP09093 270 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 RFPL3SP0C7P2 107 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 RNF224P0DH78 156 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 CYP4B1P13584 511 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 CNR1P21554 472 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 GPC1P35052 558 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 MDH1P40925 334 aaKnown RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 KIR3DL1P43629 444 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 KCNK10P57789 538 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 RPS26P62854 115 aaKnown RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 PLCXD2Q0VAA5 305 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 LASP1Q14847 261 aaKnown RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 GTDC1Q4AE62 458 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 HLA-DQA1Q5Y7H0 255 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 MFSD12Q6NUT3 480 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 OPN5Q6U736 354 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 FAM180AQ6UWF9 173 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 SZRD1Q7Z422 152 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 HOMEZQ8IX15 550 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 GPALPP1Q8IXQ4 340 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 KIRREL3Q8IZU9 778 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 SLC34A3Q8N130 599 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 FBXW8Q8N3Y1 598 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 SLC15A4Q8N697 577 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 BCORP1Q8N888 145 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 GOLM1Q8NBJ4 401 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 TMEM178AQ8NBL3 297 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 SLC16A11Q8NCK7 471 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 FAM13CQ8NE31 585 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 OR52N2Q8NGI0 321 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 OR5D16Q8NGK9 328 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 CEP70Q8NHQ1 597 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 ZFP28Q8NHY6 868 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 RNF138Q8WVD3 245 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 NR4A3Q92570 626 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 EFHD2Q96C19 240 aaPredicted RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 ERP27Q96DN0 273 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 ZNF317Q96PQ6 595 aaPredicted RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 KLHDC3Q9BQ90 382 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 CCDC28BQ9BUN5 200 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 CCDC134Q9H6E4 229 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 GALNT9Q9HCQ5 603 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 TIMMDC1Q9NPL8 285 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 TCF7L2Q9NQB0 619 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 SERHLQ9NQF3 203 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 SDR39U1Q9NRG7 319 aaPredicted RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 OLAHQ9NV23 265 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 KLF13Q9Y2Y9 288 aaPredicted RBP6.41□□□□□ -1.38
SMG6-209ENST00000571442 SNX8Q9Y5X2 465 aa6.41□□□□□ -1.38
SMG6-209ENST00000571442 NPIPA5A0A0B4J1W7 369 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 PRAMEF27A3QJZ7 478 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 NPIPA7E9PJI5 369 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 NPIPA5E9PKD4 350 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CDK2AP1O14519 115 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 DYNC1I1O14576 645 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 UBDO15205 165 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ACOX3O15254 700 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CFLARO15519 480 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ICOSLGO75144 302 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 COQ9O75208 318 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TRIM3O75382 744 aaPredicted RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 BCAS2O75934 225 aaPredicted RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 SLITRK5O94991 958 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 NKX2-2O95096 273 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TGDSO95455 350 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 HMGN2P05204 90 aaKnown RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 GSNP06396 782 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 PGRP06401 933 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 IFI6P09912 130 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 NPIPA8P0DM63 369 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 HOXB9P17482 250 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms