RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 MTERF3Q96E29 417 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 NODALQ96S42 347 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 ANGPTL4Q9BY76 406 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 AKTIPQ9H8T0 292 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 ASIC5Q9NY37 505 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 SH3BP4Q9P0V3 963 aa12.29□□□□□ -0.44
RPAIN-207ENST00000570883 MAST4O15021 2626 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 NBPF19A0A087WUL8 3843 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ITPR2Q14571 2701 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 OR6C70A6NIJ9 312 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ADAM10O14672 748 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 TSPAN2O60636 221 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 LAMP1P11279 417 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 G6PDP11413 515 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 PRPS2P11908 318 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ENDOUP21128 410 aaKnown RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 PTGS2P35354 604 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 CASP3P42574 277 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 PER3P56645 1201 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 EMX2Q04743 252 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 TTMPQ5BVD1 217 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 TBCELQ5QJ74 424 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 AGBL2Q5U5Z8 902 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ARHGAP11AQ6P4F7 1023 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 TMEM81Q6P7N7 255 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 C3P1Q6ZMU1 363 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 NCCRP1Q6ZVX7 275 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 TRILQ7L0X0 811 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 NUP54Q7Z3B4 507 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 CD163Q86VB7 1156 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 RIMKLAQ8IXN7 391 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 FAM57AQ8TBR7 257 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 HOXB13Q92826 284 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ZBED6CLQ96FA7 236 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 SLC35A4Q96G79 324 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ZNF597Q96LX8 424 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 JSRP1Q96MG2 331 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 COL21A1Q96P44 957 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 NUF2Q9BZD4 464 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 GALNT9Q9HCQ5 603 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 SIRT3Q9NTG7 399 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 ACSS1Q9NUB1 689 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 NKIRAS1Q9NYS0 192 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 TNFRSF10DQ9UBN6 386 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 PLEKHB1Q9UF11 243 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-207ENST00000570883 KIAA1549Q9HCM3 1950 aa12.28□□□□□ -0.44
RPAIN-207ENST00000570883 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 A0A1B0GVC2 190 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 PRAMEF25A6NGN4 478 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 CYSRT1A8MQ03 144 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 REM1O75628 298 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 SNX4O95219 450 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 GP1BBP13224 206 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 DIO3P55073 304 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 MANFP55145 182 aaKnown RBP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 CASP6P55212 293 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 C21orf58P58505 322 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 ADORA2A-AS1P86434 159 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 OCRLQ01968 901 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 SMU1Q2TAY7 513 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 EMC4Q5J8M3 183 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 LARP4Q71RC2 724 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 R3HCC1LQ7Z5L2 792 aaKnown RBP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 ZFP28Q8NHY6 868 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 RNF138Q8WVD3 245 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 ITLN2Q8WWU7 325 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 EFHD2Q96C19 240 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 GIMAP5Q96F15 307 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 TMEM41AQ96HV5 264 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 DMRTA2Q96SC8 542 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 ADOQ96SZ5 270 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 SH3GL2Q99962 352 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 LMF2Q9BU23 707 aaKnown RBP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 UBQLN3Q9H347 655 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 METTL7AQ9H8H3 244 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 MEAF6Q9HAF1 191 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 EQTNQ9NQ60 294 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 THAP1Q9NVV9 213 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.45
RPAIN-207ENST00000570883 NTMQ9P121 344 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 SPRR3Q9UBC9 169 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 C15orf41Q9Y2V0 281 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 MEMO1Q9Y316 297 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 PKDREJQ9NTG1 2253 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 DCHS2Q6V1P9 2916 aa12.27□□□□□ -0.45
RPAIN-207ENST00000570883 DOCK7Q96N67 2140 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 B4DXG7 233 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 SDHDO14521 159 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 PRRG2O14669 202 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 TPOP07202 933 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 PRPS1L1P21108 318 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 GDF1P27539 372 aa12.26□□□□□ -0.45
RPAIN-207ENST00000570883 GPC1P35052 558 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms