RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 GSX1Q9H4S2 264 aaPredicted RBP13.42□□□□□ -0.26
NDE1-203ENST00000570727 TMEM216Q9P0N5 145 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 MCM8Q9UJA3 840 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 FBXL2Q9UKC9 423 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 DLGAP4Q9Y2H0 992 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 ZIC3O60481 467 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 BCAS2O75934 225 aaPredicted RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 URI1O94763 535 aaPredicted RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 SUPT7LO94864 414 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 ATE1O95260 518 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 RAF1P04049 648 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 IL3P08700 152 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 SNRPAP09012 282 aaKnown RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 HSD3B1P14060 373 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 DRD2P14416 443 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 HSD3B2P26439 372 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 GCAP28676 217 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 CORO7P57737 925 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 PPP2R2AP63151 447 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 OR5M10Q6IEU7 315 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 ENPP6Q6UWR7 440 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 NPSR1Q6W5P4 371 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 TIFABQ6ZNK6 161 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 NOA1Q8NC60 698 aaKnown RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 WNT2BQ93097 391 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 INTS12Q96CB8 462 aaKnown RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 TMCO6Q96DC7 493 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 SLC35A4Q96G79 324 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 APIPQ96GX9 242 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 VSTM2LQ96N03 204 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 ADOQ96SZ5 270 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 FMO2Q99518 471 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 TM9SF2Q99805 663 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 RBM24Q9BX46 236 aaKnown RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 TAS2R10Q9NYW0 307 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 CLCF1Q9UBD9 225 aa13.41□□□□□ -0.26
NDE1-203ENST00000570727 RPH3AQ9Y2J0 694 aaPredicted RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 MRPS18CQ9Y3D5 142 aaKnown RBP13.41□□□□□ -0.26
NDE1-203ENST00000570727 A0A1W2PPR1 153 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 H0Y3Z8 333 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 PLOD2O00469 737 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 DLX3O60479 287 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 ERN1O75460 977 aaKnown RBP13.4□□□□□ -0.26
NDE1-203ENST00000570727 ESRRBO95718 433 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 KRT6AP02538 564 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 HRGP04196 525 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 KRT6BP04259 564 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 SRD5A2P31213 254 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 GCKP35557 465 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 KRT6CP48668 564 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 HTR6P50406 440 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 GAS1P54826 345 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 CLDN18P56856 261 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 CSTF3Q12996 717 aaKnown RBP13.4□□□□□ -0.26
NDE1-203ENST00000570727 RASA2Q15283 850 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 WHAMMP3Q1A5X7 153 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 PRSS53Q2L4Q9 553 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 DEFB113Q30KQ7 82 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 LUZP2Q86TE4 346 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 IFNEQ86WN2 208 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 OR9A2Q8NGT5 310 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 C16orf78Q8WTQ4 265 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 EXOSC8Q96B26 276 aaKnown RBP13.4□□□□□ -0.26
NDE1-203ENST00000570727 ERP27Q96DN0 273 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 C11orf24Q96F05 449 aaPredicted RBP13.4□□□□□ -0.26
NDE1-203ENST00000570727 ZFP3Q96NJ6 502 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 DACH2Q96NX9 599 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 ZNF382Q96SR6 550 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 SFXN3Q9BWM7 321 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 ACPTQ9BZG2 426 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 GALNT8Q9NY28 637 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 WIF1Q9Y5W5 379 aa13.4□□□□□ -0.26
NDE1-203ENST00000570727 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
NDE1-203ENST00000570727 C17orf51A8MQB3 221 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 A8MXE2 369 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 PCDH7O60245 1069 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 PLOD3O60568 738 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 ABCB7O75027 752 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 ULK1O75385 1050 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 GOSR1O95249 250 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 FOSL1P15407 271 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 ZNF708P17019 499 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 IMPDH1P20839 514 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 CHMP24386 653 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 PNLIPRP2P54317 469 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 B3GALT5-AS1P59052 145 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 FBXW10Q5XX13 1052 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 GPRIN3Q6ZVF9 776 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 LARP4Q71RC2 724 aaKnown RBP eCLIP13.39□□□□□ -0.27
NDE1-203ENST00000570727 GCNT2Q8N0V5 402 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 GBP7Q8N8V2 638 aaPredicted RBP13.39□□□□□ -0.27
NDE1-203ENST00000570727 OR7G2Q8NG99 324 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 METTL6Q8TCB7 284 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
NDE1-203ENST00000570727 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms