RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 OR6C70A6NIJ9 312 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 CCL21O00585 134 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PRRG2O14669 202 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 REM1O75628 298 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PSMG1O95456 288 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 IGHG3P01860 377 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 RNF224P0DH78 156 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PRPS1L1P21108 318 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PTGS2P35354 604 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 KRT20P35900 424 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PNLIPRP2P54317 469 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 CORO7P57737 925 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PSG6Q00889 435 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNF155Q12901 538 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 SNTA1Q13424 505 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 MLC1Q15049 377 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 C3AR1Q16581 482 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 CPTPQ5TA50 214 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 BICRALQ6AI39 1079 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 MTFR2Q6P444 385 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 NPSR1Q6W5P4 371 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 FGD2Q7Z6J4 655 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 SLC44A2Q8IWA5 706 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 LRRC34Q8IZ02 419 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 OR7A2PQ8NGA2 310 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 HGDQ93099 445 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 TMCO6Q96DC7 493 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 SLC35A4Q96G79 324 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 ATP6V1G3Q96LB4 118 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNF597Q96LX8 424 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 RILPQ96NA2 401 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 NUF2Q9BZD4 464 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 VIPAS39Q9H9C1 493 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 ATAD3AQ9NVI7 634 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 QPCTLQ9NXS2 382 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 ASIC5Q9NY37 505 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 SUCOQ9UBS9 1254 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 MAPRE3Q9UPY8 281 aa12.67□□□□□ -0.38
HERPUD1-218ENST00000569569 TTC36A6NLP5 189 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 TSPAN2O60636 221 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 UGT2B11O75310 529 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 LAMP1P11279 417 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 G6PDP11413 515 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 ESRRAP11474 423 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 CLDN8P56748 225 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 EFR3AQ14156 821 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 DESI1Q6ICB0 168 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 GOLGA6L1Q8N7Z2 621 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 FAM57AQ8TBR7 257 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 NTNG2Q96CW9 530 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 COQ8BQ96D53 544 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 TMEM41AQ96HV5 264 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 COL21A1Q96P44 957 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 NODALQ96S42 347 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 ADOQ96SZ5 270 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 LDAHQ9H6V9 325 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 METTL7AQ9H8H3 244 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 MEAF6Q9HAF1 191 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 C3orf14Q9HBI5 128 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 NTMQ9P121 344 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 B4GALT7Q9UBV7 327 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 TINAGQ9UJW2 476 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 OR10H1Q9Y4A9 318 aa12.66□□□□□ -0.38
HERPUD1-218ENST00000569569 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 UTP20O75691 2785 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 CACNA1CQ13936 2221 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 A0A1W2PRB8 838 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 OR14I1A6ND48 311 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 LRRC3CA6NJW4 275 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 SLCO1B7G3V0H7 640 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 KLF11O14901 512 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 EMC8O43402 210 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 SUSD5O60279 629 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 HCN1O60741 890 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 ZG16O60844 167 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 ICOSLGO75144 302 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 TPOP07202 933 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 LBPP18428 481 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 IL12BP29460 328 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 MASP1P48740 699 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 C21orf58P58505 322 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 MRPS22P82650 360 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 GAB1Q13480 694 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 LSM12Q3MHD2 195 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 LARP4Q71RC2 724 aaKnown RBP eCLIP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms