RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 HMGCS1Q01581 520 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 HIST2H2ACQ16777 129 aaPredicted RBP12.29□□□□□ -0.44
SMG1-213ENST00000567737 PAGE2BQ5JRK9 111 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 HIST2H2AA3Q6FI13 130 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 OR5M10Q6IEU7 315 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 OR4C11Q6IEV9 310 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 ZNF619Q8N2I2 560 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 ZNF615Q8N8J6 731 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 C2CD4AQ8NCU7 369 aaPredicted RBP12.29□□□□□ -0.44
SMG1-213ENST00000567737 HSD17B8Q92506 261 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 KAT2AQ92830 837 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 TMCO6Q96DC7 493 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 GMPPAQ96IJ6 420 aaPredicted RBP12.29□□□□□ -0.44
SMG1-213ENST00000567737 EFCAB11Q9BUY7 163 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 CLEC4AQ9UMR7 237 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
SMG1-213ENST00000567737 TMEM89A2RUT3 159 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 SAP18O00422 153 aaKnown RBP12.28□□□□□ -0.44
SMG1-213ENST00000567737 UGT2B11O75310 529 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 VENTXO95231 258 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 CCDC166P0CW27 439 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 IL11P20809 199 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 IL32P24001 234 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 DSCR4P56555 118 aaPredicted RBP12.28□□□□□ -0.44
SMG1-213ENST00000567737 LAPTM5Q13571 262 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 TAB1Q15750 504 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 C18orf21Q32NC0 220 aaPredicted RBP12.28□□□□□ -0.44
SMG1-213ENST00000567737 MIDNQ504T8 468 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 FRA10AC1Q70Z53 315 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 ATG4DQ86TL0 474 aaPredicted RBP12.28□□□□□ -0.44
SMG1-213ENST00000567737 VSTM4Q8IW00 320 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 CCDC170Q8IYT3 715 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 SYCE1Q8N0S2 351 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 OR7G1Q8NGA0 311 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 OR4K17Q8NGC6 315 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 C3orf49Q96BT1 292 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 SORBS1Q9BX66 1292 aaKnown RBP12.28□□□□□ -0.44
SMG1-213ENST00000567737 ZNF696Q9H7X3 374 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 CBLN4Q9NTU7 201 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 EHD3Q9NZN3 535 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 OARD1Q9Y530 152 aa12.28□□□□□ -0.44
SMG1-213ENST00000567737 NPEPPSL1A6NEC2 478 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 DPRXA6NFQ7 191 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 GLOD5A6NK44 160 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 WASHC1A8K0Z3 465 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 FAM157AC9JC47 383 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 H3BML4 177 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 ACOX3O15254 700 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 RAMP1O60894 148 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 SS18L1O75177 396 aaPredicted RBP12.27□□□□□ -0.45
SMG1-213ENST00000567737 TGFB1P01137 390 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 CCDC175P0C221 793 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 CT62P0C5K7 136 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 EPB42P16452 691 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 RAP1GDS1P52306 607 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 PGGT1BP53609 377 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 HNRNPH2P55795 449 aaKnown RBP12.27□□□□□ -0.45
SMG1-213ENST00000567737 IRF9Q00978 393 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 DEPDC1Q5TB30 811 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 FIGNL1Q6PIW4 674 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 METTL25Q8N6Q8 603 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 PIWIL2Q8TC59 973 aaKnown RBP12.27□□□□□ -0.45
SMG1-213ENST00000567737 ZNF473Q8WTR7 871 aaKnown RBP12.27□□□□□ -0.45
SMG1-213ENST00000567737 PDLIM5Q96HC4 596 aaKnown RBP12.27□□□□□ -0.45
SMG1-213ENST00000567737 WDR41Q9HAD4 459 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 FOLH1BQ9HBA9 442 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 XPR1Q9UBH6 696 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 CFL2Q9Y281 166 aa12.27□□□□□ -0.45
SMG1-213ENST00000567737 ALPK2Q86TB3 2170 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 SHISA9B4DS77 424 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 NR2F6P10588 404 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 PCNAP12004 261 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 HK1P19367 917 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 GRK2P25098 689 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 TTKP33981 857 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 CLDN20P56880 219 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 TSC22D1Q15714 1073 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 KHDRBS2Q5VWX1 349 aaKnown RBP12.26□□□□□ -0.45
SMG1-213ENST00000567737 C11orf71Q6IPW1 123 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 CCDC25Q86WR0 208 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 PLD6Q8N2A8 252 aaKnown RBP12.26□□□□□ -0.45
SMG1-213ENST00000567737 ZCCHC7Q8N3Z6 543 aaKnown RBP12.26□□□□□ -0.45
SMG1-213ENST00000567737 SNX31Q8N9S9 440 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 ADCY4Q8NFM4 1077 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 WDR34Q96EX3 536 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 CMTM7Q96FZ5 175 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 ITPAQ9BY32 194 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 BHLHE41Q9C0J9 482 aaPredicted RBP12.26□□□□□ -0.45
SMG1-213ENST00000567737 C12orf49Q9H741 205 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 ZNF337Q9Y3M9 751 aa12.26□□□□□ -0.45
SMG1-213ENST00000567737 H7C417 338 aa12.25□□□□□ -0.45
SMG1-213ENST00000567737 PRAMEF4O60810 478 aa12.25□□□□□ -0.45
SMG1-213ENST00000567737 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
SMG1-213ENST00000567737 MLNP12872 115 aa12.25□□□□□ -0.45
SMG1-213ENST00000567737 CD22P20273 847 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms