RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TMEM211Q6ICI0 200 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 ANKRD26P1Q6NSI1 321 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 NOXRED1Q6NXP6 359 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 MCEMP1Q8IX19 187 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 SLC34A3Q8N130 599 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 ZNF781Q8N8C0 355 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 SARAFQ96BY9 339 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 FCRL1Q96LA6 429 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 NODALQ96S42 347 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 CCT7Q99832 543 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 LRTM1Q9HBL6 345 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 KLRF1Q9NZS2 232 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 PRODH2Q9UF12 536 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 RNF6Q9Y252 685 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 WBP11Q9Y2W2 641 aaKnown RBP12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 RAP2CQ9Y3L5 183 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 PKDREJQ9NTG1 2253 aa12.49□□□□□ -0.41
VPS9D1-204ENST00000565023 NKX2-6A6NCS4 301 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 FIGNL2A6NMB9 653 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 LSM1O15116 133 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 AKAP10O43572 662 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 TRIM3O75382 744 aaPredicted RBP12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 DDCP20711 480 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 ACVR2AP27037 513 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 MPIP34949 423 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 MC3RP41968 323 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 CORO7P57737 925 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 RPL38P63173 70 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 ZNF155Q12901 538 aaPredicted RBP12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 HYAL4Q2M3T9 481 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 GALNTL6Q49A17 601 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 TBCELQ5QJ74 424 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 ANGPTL8Q6UXH0 198 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 TRIM42Q8IWZ5 723 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 DDIASQ8IXT1 998 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 KIRREL3Q8IZU9 778 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 OR7G2Q8NG99 324 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 CLHC1Q8NHS4 586 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 ZNF675Q8TD23 568 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 RND1Q92730 232 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 TMBIM1Q969X1 311 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 CTHRC1Q96CG8 243 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 HSPBAP1Q96EW2 488 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 EGLN2Q96KS0 407 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 C3orf30Q96M34 536 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 GNRHR2Q96P88 292 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 UCK2Q9BZX2 261 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 FOLH1BQ9HBA9 442 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 CHST11Q9NPF2 352 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 THAP1Q9NVV9 213 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 MAPRE3Q9UPY8 281 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 SLC6A5Q9Y345 797 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
VPS9D1-204ENST00000565023 MED12Q93074 2177 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 SETD2Q9BYW2 2564 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 OR14I1A6ND48 311 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 KLF11O14901 512 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 SUSD5O60279 629 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 HCN1O60741 890 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 UGT2B11O75310 529 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 ERN1O75460 977 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 AGAP20933 346 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 TCEA1P23193 301 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 TACR1P25103 407 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 NTSP30990 170 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 KRT20P35900 424 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 KIR3DL1P43629 444 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 PPICP45877 212 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 RPL14P50914 215 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 RFTN2Q52LD8 501 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 ATG16L1Q676U5 607 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 FAM71E1Q6IPT2 247 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 TMEM107Q6UX40 140 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 NPSR1Q6W5P4 371 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 B3GNT6Q6ZMB0 384 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 NUP54Q7Z3B4 507 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 WDR53Q7Z5U6 358 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 SLC44A2Q8IWA5 706 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 SAMD14Q8IZD0 417 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 C17orf47Q8NEP4 570 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 HGDQ93099 445 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 PPP3R2Q96LZ3 170 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 TSSK3Q96PN8 268 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 ADOQ96SZ5 270 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 ACBD3Q9H3P7 528 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 GLIPR2Q9H4G4 154 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 MYNNQ9NPC7 610 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 GIMAP2Q9UG22 337 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 TMED5Q9Y3A6 229 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms