RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 C17orf99Q6UX52 265 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SMG7Q92540 1137 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GCDHQ92947 438 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ECHDC3Q96DC8 303 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ABHD1Q96SE0 405 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ARHGAP9Q9BRR9 750 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 DDX31Q9H8H2 851 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ALPK2Q86TB3 2170 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 POM121CA8CG34 1229 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ERAL1O75616 437 aaKnown RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C8orf89P0DMQ9 161 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C1GALT1C1LP0DN25 315 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TBXA2RP21731 343 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 KCNJ5P48544 419 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ACLYP53396 1101 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 EXOSC2Q13868 293 aaKnown RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 BHLHB9Q6PI77 547 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RRM2BQ7LG56 351 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 KANSL1Q7Z3B3 1105 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 OR51I1Q9H343 314 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SPATA2Q9UM82 520 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SIRT4Q9Y6E7 314 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC16A5O15375 505 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ATXN8OSP0DMR3 200 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 POLR2CP19387 275 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HSD3B2P26439 372 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C21orf58P58505 322 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RGS1Q08116 209 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ARL9Q6T311 187 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 LYPD4Q6UWN0 246 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 DDX53Q86TM3 631 aaKnown RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 LIX1LQ8IVB5 337 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 OR56A3Q8NH54 315 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RBCK1Q9BYM8 510 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RETREG1Q9H6L5 497 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TEX10Q9NXF1 929 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RASD1Q9Y272 281 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CHD7Q9P2D1 2997 aa19.29■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TEX13CA0A0J9YWL9 993 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PRODHO43272 600 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SSNA1O43805 119 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FUT1P19526 365 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PIP5KL1Q5T9C9 394 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TMEM65Q6PI78 240 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RFT1Q96AA3 541 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZDHHC4Q9NPG8 344 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 MAN2C1Q9NTJ4 1040 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PITPNM1O00562 1244 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FCER2P06734 321 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 STOMP27105 288 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC3A1Q07837 685 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SNTA1Q13424 505 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ARSIQ5FYB1 569 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC27A4Q6P1M0 643 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PRSS45Q7RTY3 260 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HSD17B8Q92506 261 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C1QTNF7Q9BXJ2 289 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 A0A087WUU8 490 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FAM170BA6NMN3 283 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SHOXO15266 292 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 MPC2O95563 127 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 AHRP35869 848 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 BTN1A1Q13410 526 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 LASP1Q14847 261 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C3orf38Q5JPI3 329 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 DOK4Q8TEW6 326 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 KCNJ15Q99712 375 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 NLGN3Q9NZ94 848 aa19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CXXC1Q9P0U4 656 aaPredicted RBP19.28■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SERTM1A2A2V5 107 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PDPK1O15530 556 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 DHFRP00374 187 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 MT-ND4P03905 459 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HLA-DPB1P04440 258 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 MRPL3P09001 348 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ACADMP11310 421 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PSMB5P28074 263 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GABRR2P28476 465 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TALDO1P37837 337 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ATP12AP54707 1039 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TCTN1Q2MV58 587 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ASTLQ6HA08 431 aaPredicted RBP19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 MZT2AQ6P582 158 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC36A4Q6YBV0 504 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZNF607Q96SK3 696 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SOSTQ9BQB4 213 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 OR2AG1Q9H205 316 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLCO1C1Q9NYB5 712 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RDH8Q9NYR8 311 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 A0A1W2PS29 197 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PLPP1O14494 284 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GREM1O60565 184 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ATG13O75143 517 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 REM1O75628 298 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TPPPO94811 219 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RAF1P04049 648 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC6A1P30531 599 aa19.27■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TRIM23P36406 574 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms