RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 COL21A1Q96P44 957 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 NODALQ96S42 347 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 DMRTA2Q96SC8 542 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 ACKR4Q9NPB9 350 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 KLRF1Q9NZS2 232 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 C19orf53Q9UNZ5 99 aaPredicted RBP16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 OR10H1Q9Y4A9 318 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 HRH3Q9Y5N1 445 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 SPTBN1Q01082 2364 aaKnown RBP16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 FREM3P0C091 2139 aa16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 NCOA6Q14686 2063 aaPredicted RBP16.81■□□□□ 0.28
SYNGR3-204ENST00000564642 OR6C70A6NIJ9 312 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 UPK1AO00322 258 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ADAM10O14672 748 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 GNB5O14775 395 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 TBX19O60806 448 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 TRAPPC6AO75865 159 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 GRK2P25098 689 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ELAVL4P26378 380 aaKnown RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 IL12BP29460 328 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 MANFP55145 182 aaKnown RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 HSPB3Q12988 150 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 SNTA1Q13424 505 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 TOMM20Q15388 145 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNHIT3Q15649 155 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 XKR7Q5GH72 579 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 WLSQ5T9L3 541 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 SP5Q6BEB4 398 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 DESI1Q6ICB0 168 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF585AQ6P3V2 769 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 TMEM81Q6P7N7 255 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF551Q7Z340 670 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 R3HCC1LQ7Z5L2 792 aaKnown RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 OR5M9Q8NGP3 310 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 OR1J4Q8NGS1 313 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 TUBGCP3Q96CW5 907 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 MTERF3Q96E29 417 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ZBED6CLQ96FA7 236 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF764Q96H86 408 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 C3orf30Q96M34 536 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 GNRHR2Q96P88 292 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 PAIP2Q9BPZ3 127 aaKnown RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 OSBPL11Q9BXB4 747 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 PNPLA3Q9NST1 481 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 COQ3Q9NZJ6 369 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 GIMAP2Q9UG22 337 aa16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 KLF2Q9Y5W3 355 aaPredicted RBP16.8■□□□□ 0.28
SYNGR3-204ENST00000564642 FIGNL2A6NMB9 653 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 ITM2AO43736 263 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 ICOSLGO75144 302 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 SNUPNO95149 360 aaKnown RBP16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 DHRS4L1P0CG22 281 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 DCTP40126 519 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 EFR3AQ14156 821 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 EMC4Q5J8M3 183 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 HHATQ5VTY9 493 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF787Q6DD87 383 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 NPSR1Q6W5P4 371 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 LARP4Q71RC2 724 aaKnown RBP eCLIP16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 OR2L13Q8N349 312 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 FNDC5Q8NAU1 212 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 NEIL3Q8TAT5 605 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 CIDECQ96AQ7 238 aaPredicted RBP16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 SLC35A4Q96G79 324 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 ADOQ96SZ5 270 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 TNFRSF10DQ9UBN6 386 aa16.79■□□□□ 0.28
SYNGR3-204ENST00000564642 C2orf72A6NCS6 295 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 PRAMEF25A6NGN4 478 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 TSPAN2O60636 221 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 IFI6P09912 130 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 PRPS2P11908 318 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 HTR1EP28566 365 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 HPCAL1P37235 193 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 RPL3P39023 403 aaKnown RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 SLC1A6P48664 564 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 TRPC1P48995 793 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 PNLIPRP2P54317 469 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 MRPS22P82650 360 aaKnown RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 PSG6Q00889 435 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 STX3Q13277 289 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 PDE7AQ13946 482 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 MPP2Q14168 576 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF385BQ569K4 471 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 C6orf136Q5SQH8 315 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 IL23RQ5VWK5 629 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 CES4AQ5XG92 561 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 TIGD3Q6B0B8 471 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ANGPTL8Q6UXH0 198 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF781Q8N8C0 355 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ANKRD42Q8N9B4 389 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 OR4N2Q8NGD1 307 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 RND1Q92730 232 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 SDCCAG3Q96C92 435 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 C1orf50Q9BV19 199 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 SLC6A15Q9H2J7 730 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ZNF395Q9H8N7 513 aaPredicted RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 GALNT9Q9HCQ5 603 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ACSS1Q9NUB1 689 aaPredicted RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 ALKBH4Q9NXW9 302 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms