RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 ULK2Q8IYT8 1036 aa23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 OR4N2Q8NGD1 307 aa23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 OR1J4Q8NGS1 313 aa23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 ADOQ96SZ5 270 aa23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 ROPN1BQ9BZX4 212 aaPredicted RBP23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 ROPN1Q9HAT0 212 aaPredicted RBP23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 SERHLQ9NQF3 203 aa23.09■■□□□ 1.29
AC009041.3-201ENST00000564390 FREM3P0C091 2139 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 A0A0G2JNJ9 132 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 OR6C70A6NIJ9 312 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 KDM4EB2RXH2 506 aaPredicted RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 SNPHO15079 494 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 ZNF500O60304 480 aaPredicted RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 NPHS1O60500 1241 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 CHEK2O96017 543 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 NEFHP12036 1026 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 SDC1P18827 310 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 ELAVL4P26378 380 aaKnown RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 IL12BP29460 328 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 ARL13AQ5H913 290 aaPredicted RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 DCST1Q5T197 706 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 SLC30A6Q6NXT4 461 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 TMEM81Q6P7N7 255 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 MEX3BQ6ZN04 569 aaKnown RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 WDR53Q7Z5U6 358 aaPredicted RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 ZNF295-AS1Q8N0V1 137 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 CLHC1Q8NHS4 586 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 TWIST2Q8WVJ9 160 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 EFHD2Q96C19 240 aaPredicted RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 AMDHD1Q96NU7 426 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 TSSK3Q96PN8 268 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 NPDC1Q9NQX5 325 aaPredicted RBP23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 TAS2R9Q9NYW1 312 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 TAS2R7Q9NYW3 318 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 Q9UFV3 132 aa23.08■■□□□ 1.29
AC009041.3-201ENST00000564390 ADGRG4Q8IZF6 3080 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 NPIPB8E9PQR5 432 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 AKAP10O43572 662 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 TSPAN2O60636 221 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 COQ9O75208 318 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 TOXO94900 526 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 GABRA1P14867 456 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 KRT20P35900 424 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 WNT3P56703 355 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 TFF3Q07654 80 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 GALNTL6Q49A17 601 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 SH2D4BQ5SQS7 431 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 LARP4Q71RC2 724 aaKnown RBP eCLIP23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 YRDCQ86U90 279 aaKnown RBP23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 LURAP1LQ8IV03 231 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 FAM83FQ8NEG4 500 aaPredicted RBP23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 SLC35A4Q96G79 324 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 FCRL1Q96LA6 429 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 TIMP4Q99727 224 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 CCT7Q99832 543 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 STMN4Q9H169 189 aaPredicted RBP23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 DDX18Q9NVP1 670 aaKnown RBP23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 GIMAP2Q9UG22 337 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 WBP11Q9Y2W2 641 aaKnown RBP23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 OR10H1Q9Y4A9 318 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 APCP25054 2843 aa23.07■■□□□ 1.28
AC009041.3-201ENST00000564390 PIP5K1BO14986 540 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 LSM1O15116 133 aaKnown RBP23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 ARRB2P32121 409 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 HSPB3Q12988 150 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 SNTA1Q13424 505 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 RFTN2Q52LD8 501 aaPredicted RBP23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 ZNF385BQ569K4 471 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 RNF165Q6ZSG1 346 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 ZNF551Q7Z340 670 aaPredicted RBP23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 CIDECQ96AQ7 238 aaPredicted RBP23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 ZBTB9Q96C00 473 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 TMCO6Q96DC7 493 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 METTL2AQ96IZ6 378 aaKnown RBP23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 PARD6BQ9BYG5 372 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 ENKD1Q9H0I2 346 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 KCNJ16Q9NPI9 418 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 BAIAP2L1Q9UHR4 511 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 C19orf53Q9UNZ5 99 aaPredicted RBP23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 CAMK2AQ9UQM7 478 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 TRAF6Q9Y4K3 522 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 ABCA12Q86UK0 2595 aa23.06■■□□□ 1.28
AC009041.3-201ENST00000564390 PKDREJQ9NTG1 2253 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 A0A087WV62 115 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 C17orf51A8MQB3 221 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 UPK1AO00322 258 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 PDPK1O15530 556 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 ABCB7O75027 752 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 PSG6Q00889 435 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 UGT3A2Q3SY77 523 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 KRT71Q3SY84 523 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 ACSF3Q4G176 576 aaPredicted RBP23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 SEM1Q6ZVN7 128 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 LIX1LQ8IVB5 337 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 OR2L13Q8N349 312 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 WDSUB1Q8N9V3 476 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 ACBD4Q8NC06 268 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 SPOCK3Q9BQ16 436 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 UGT2B28Q9BY64 529 aa23.05■■□□□ 1.28
AC009041.3-201ENST00000564390 WIF1Q9Y5W5 379 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms